Gene Syncc9605_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0018 
Symbol 
ID3735541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp20356 
End bp21003 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content60% 
IMG OID637774601 
ProductType II secretory pathway component PulF-like 
Protein accessionYP_380355 
Protein GI78211576 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCT TCATTGCCTC CTACGCCGGT CCCACCGGAC AACCGCGAAC GGTGACGATC 
AAGGCAGCCA ATCTGGCTGA AGCCAAAAAG CTGCTGCGGC GTCGGGGCAT TCGTGCCGAA
GAGCTGCGGC CCGTCAGCCT CGGAAACACC CAGGACGGCA AAGCTAATGG GGCCGACGCG
GCAGGTCTCA GATCAATCGA CCTCAACCGC TTGTTTGAGA AAGCGCCGGG CGTCAAGGAG
AAGGCCGTGT TCGCCAGCAA GCTGGCGGCC CTGGTCGATG CCGGAGTGCC GATCCTGATG
TCGATGGAGA TCTCGAGCGA AACCGCCGGC AACGCGATCA TTTCCGATGC GATCCTTGCC
TCGCGGGGCA TGGTGCAGGA GGGCGTGCTT CTGAGCAATG CGCTAATCCG CCAGAAGGTG
CTGCCCGACA TGGCTCTGAA CATGCTGGCC ATCGGCGAGG AAACTGGCGA GATGGACAAA
ATGCTCAGCA AGGTGGCGGA CTTCTACGAA GACGAAGTCG GCGCCATGGT CAAGGCGCTC
ACCTCAATGC TCGAGCCCGC GATGATTGTG GTGGTGGGGG GAATCGTGGG ATCCATCCTG
CTGGCGATGT ACCTTCCGAT GTTCACCGTG TTTGATCAGA TCCAGTAA
 
Protein sequence
MTAFIASYAG PTGQPRTVTI KAANLAEAKK LLRRRGIRAE ELRPVSLGNT QDGKANGADA 
AGLRSIDLNR LFEKAPGVKE KAVFASKLAA LVDAGVPILM SMEISSETAG NAIISDAILA
SRGMVQEGVL LSNALIRQKV LPDMALNMLA IGEETGEMDK MLSKVADFYE DEVGAMVKAL
TSMLEPAMIV VVGGIVGSIL LAMYLPMFTV FDQIQ