Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0018 |
Symbol | |
ID | 3735541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 20356 |
End bp | 21003 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637774601 |
Product | Type II secretory pathway component PulF-like |
Protein accession | YP_380355 |
Protein GI | 78211576 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCT TCATTGCCTC CTACGCCGGT CCCACCGGAC AACCGCGAAC GGTGACGATC AAGGCAGCCA ATCTGGCTGA AGCCAAAAAG CTGCTGCGGC GTCGGGGCAT TCGTGCCGAA GAGCTGCGGC CCGTCAGCCT CGGAAACACC CAGGACGGCA AAGCTAATGG GGCCGACGCG GCAGGTCTCA GATCAATCGA CCTCAACCGC TTGTTTGAGA AAGCGCCGGG CGTCAAGGAG AAGGCCGTGT TCGCCAGCAA GCTGGCGGCC CTGGTCGATG CCGGAGTGCC GATCCTGATG TCGATGGAGA TCTCGAGCGA AACCGCCGGC AACGCGATCA TTTCCGATGC GATCCTTGCC TCGCGGGGCA TGGTGCAGGA GGGCGTGCTT CTGAGCAATG CGCTAATCCG CCAGAAGGTG CTGCCCGACA TGGCTCTGAA CATGCTGGCC ATCGGCGAGG AAACTGGCGA GATGGACAAA ATGCTCAGCA AGGTGGCGGA CTTCTACGAA GACGAAGTCG GCGCCATGGT CAAGGCGCTC ACCTCAATGC TCGAGCCCGC GATGATTGTG GTGGTGGGGG GAATCGTGGG ATCCATCCTG CTGGCGATGT ACCTTCCGAT GTTCACCGTG TTTGATCAGA TCCAGTAA
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Protein sequence | MTAFIASYAG PTGQPRTVTI KAANLAEAKK LLRRRGIRAE ELRPVSLGNT QDGKANGADA AGLRSIDLNR LFEKAPGVKE KAVFASKLAA LVDAGVPILM SMEISSETAG NAIISDAILA SRGMVQEGVL LSNALIRQKV LPDMALNMLA IGEETGEMDK MLSKVADFYE DEVGAMVKAL TSMLEPAMIV VVGGIVGSIL LAMYLPMFTV FDQIQ
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