Gene Syncc9605_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0017 
Symbol 
ID3735540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp19113 
End bp20381 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content65% 
IMG OID637774600 
Producthypothetical protein 
Protein accessionYP_380354 
Protein GI78211575 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCCCT CCGCTTCCAG CCTGCTTGAT CTGATCGTTG TTGGCGGTGG TCCTGCCGGG 
TACATGGCGG CGATCACTGC AGCCGAGCAG GGGGTTCGGA AGGTGCTGGT GCTGGAAGGC
ACCCCTGAGC CCCTCCAGAA GGTGCGCATC AGTGGTGGCG GTCGCTGCAA TGTGACCCAT
GCCTGCTGGG ACCCCCGTGA ACTGGCGACC CATTACCCAC GTGGCAGTCG ACCCCTGCGG
GGGCTCTTCA GTCGCTTCGC CTGCGGTGAT GCGATCGCCT GGTTTGACGA GCATGGGCTC
ACTCTGGTGG AGGAACCCGA TGGACGGATG TTCCCGCAGC AGAACCGTTC TGAGGCCGTG
ATTCAGTGCC TGCAGAAGGC GGCAAGGGCA TCGGGTGTCC AGCTGCGCAC GAAGGCCATG
GTCCAGCAGG TGCGCGTTCA CCCAGAGGGG GGGTTTGTGC TCGAGGGCCG CGGCCTCAAG
CCCTTGCATG GGGGCTGCTT GATGCTGGCC ACGGGGGGGC ATCCTAGTGG CCGAAACCTG
GCGGAAGCCC TCGGCCACCA GGTGGTGCCG CCGGTGCCAT CCCTGTTCAG CCTCGCCCTG
CAGGCACCGG CCCTGACCGC CTGCAGTGGC ATTGCCATCG ACGATGTGGC CCTTGATCTC
AAGCTGGGCG ATCAGCGCTT CCACCAGACC GGGCGGGTGC TGATTACCCA CCGTGGTCTG
AGTGGACCCG CCACGTTGCG CCTGTCAGCC TTTGCCGCCA GGGCCCTGCA TCAGAACCGT
TACAAGGGTG AGCTCAAGTT GGATTGGAGT GCTGGGTTGG GGCGGTCGGG GCTGACCGAG
CGGTTTCAGC AATGGCGACA GGAGCAGGCC CGGCGAACCC TTTCAACAGC GAAGCCCTGC
AAGCATCTGC CGCGGCGGTT GTGGCAAGCC TTTTTGACCA TGGCTGGGGT GGAGCCAGAG
CGCCGTTGGG CGGATCTGCC GATCAAGGCG GAGCGTCGAT TGGTGGAGCT GCTCTGTGCG
CAGCGTGTGC CGATCCAGGG ACGCGGACCC TTTGGGGAGG AGTTCGTCAC CGCCGGCGGT
ATCGCCCTGG GGGACGTCAA CCTGGCCACG ATGGAGAGCC GCCGCTGTCC TGGTCTTTAC
CTGGCGGGTG AACTGCTGGA TGTGGACGGG GTGACCGGAG GTTTCAACTT TCAGGCTTGC
TGGAGTGGTG GTTGGTTGGC GGGCCATGCC ATCGCTGCAG TGATTACTGG ATCTGATCAA
ACACGGTGA
 
Protein sequence
MSPSASSLLD LIVVGGGPAG YMAAITAAEQ GVRKVLVLEG TPEPLQKVRI SGGGRCNVTH 
ACWDPRELAT HYPRGSRPLR GLFSRFACGD AIAWFDEHGL TLVEEPDGRM FPQQNRSEAV
IQCLQKAARA SGVQLRTKAM VQQVRVHPEG GFVLEGRGLK PLHGGCLMLA TGGHPSGRNL
AEALGHQVVP PVPSLFSLAL QAPALTACSG IAIDDVALDL KLGDQRFHQT GRVLITHRGL
SGPATLRLSA FAARALHQNR YKGELKLDWS AGLGRSGLTE RFQQWRQEQA RRTLSTAKPC
KHLPRRLWQA FLTMAGVEPE RRWADLPIKA ERRLVELLCA QRVPIQGRGP FGEEFVTAGG
IALGDVNLAT MESRRCPGLY LAGELLDVDG VTGGFNFQAC WSGGWLAGHA IAAVITGSDQ
TR