Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0015 |
Symbol | |
ID | 3735538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 17602 |
End bp | 18597 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637774598 |
Product | tRNA-dihydrouridine synthase A |
Protein accession | YP_380352 |
Protein GI | 78211573 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCCT CCGGATCCAC CGCTGCCTAC CGCTTCAGTG TGGCCCCGAT GCTGGATTGC ACCGACCGTC ACTTCCGGGT GCTGATGCGG CAGATCAGCC GCAGGGCGCT GCTCTACAGC GAAATGGTGG TGGCCCAGGC GCTGCACCAC AGCAAGCGAC GCAACAAGCT GCTGGACTTT GATCCTGTGG AGCATCCCAT TGCCCTGCAG GTGGGGGGAG ACGACCCAGC CCTGCTGGCC GAGGCGGCAC GACTGGCGCA GGACTGGGGC TACGACGAGA TCAACCTCAA CGTGGGTTGT CCCAGCCAGA AGGTGCAGGC CGGGAATTTC GGAGCCTGCC TCATGGCGGA ACCGGATCTG GTCGCCCGCT GCGTGGAAGC CATGGTGGGC GCAGGGGGAC TCCCCGTGAC CGTGAAGCAT CGGATCGGCA TTGACGATCT CGACAGCGAT GTGCTGCTGA TGAACTTCGT CGATCGGGTG GCACTGGCTG GGGCCAGCCG CTTCGCTATT CATGCCCGTA AGGCCTGGCT GGAGGGCCTC GATCCCAAGC AGAACCGAAC GATTCCTCCG CTGCAGCATG AGCGCGTGGT AGCTCTCAAA CAACGTCGCC CTGATCTGGT GATTGAACTC AACGGGGGGC TGGAATGCCC TGAAGACTGC CTTCAGGCAC TGGAAGGCTG CGATGGCGCC ATGGTGGGCC GAGCGGCCTA CAGCCATCCC CTGCGCTGGA CCAGCGTCGA TGCCTTGATC TTCGGGGAGG AATCACGCCA GATCCTGGCG TCAGACATTG TGGACGGGCT GCTTCCCCAT GCGGCCGCTC ACCTGGAGCA AGGGGGCCGA CTCTGGGACC TTTGCCGCCA CCTGGTGCAA CTCGTTGAAG GCGTCCGTGG TGCACGGCAC TGGCGCCGGG AGCTGGGGGA GAAAGCCCAG CGCCCAGGGG CCGACCTGAA AGTCTTGGTC CAAGCCGGGC AACAGCTGAA GGACGCAGGA CTCTGA
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Protein sequence | MTASGSTAAY RFSVAPMLDC TDRHFRVLMR QISRRALLYS EMVVAQALHH SKRRNKLLDF DPVEHPIALQ VGGDDPALLA EAARLAQDWG YDEINLNVGC PSQKVQAGNF GACLMAEPDL VARCVEAMVG AGGLPVTVKH RIGIDDLDSD VLLMNFVDRV ALAGASRFAI HARKAWLEGL DPKQNRTIPP LQHERVVALK QRRPDLVIEL NGGLECPEDC LQALEGCDGA MVGRAAYSHP LRWTSVDALI FGEESRQILA SDIVDGLLPH AAAHLEQGGR LWDLCRHLVQ LVEGVRGARH WRRELGEKAQ RPGADLKVLV QAGQQLKDAG L
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