Gene Syncc9605_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0012 
Symbol 
ID3735535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp14081 
End bp15493 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content63% 
IMG OID637774595 
Productserine phosphatase 
Protein accessionYP_380349 
Protein GI78211570 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCAGCA AGCCGCCCGG ACGTCACCCC AGCTCTGCGC AGCGGACCGG GAACCCCTCG 
CCCGAGGCGA TGGCTTCGTT GCGTCAGCTG TTTGACAGCC TCAGCAGTGA ACAGCGCCGC
AATCAGGATC TGTTGGTCTC CCTGGGGTTT GCTCTCCGCA GCTTCACCAA CCTCCAGCGT
TTTCTTGAGC TTGTGCCTGT CGTGGCCTCC CGTCTGGTTG GTGTTGAGGG GGCTTTGCTT
GTTCCGTTTC AGTCGGATGG TCGCCTTTGG CGTGATCAGT TGCAGGGGAG TCCAGCTGAG
CTGTCCCAGG ATCTTCTGCA GCGCTTAGCC GCCTTTGAAC CCGGATCTGC CGTTGGTTTC
GGCAGCGACG ATCAGCAGTT GTTGGCGCTC GACCGTCTGG TGCAACGCTG CTTGCCCAAA
GCGGCTTTGT TCGCCACGTC TGTGACGGCC CGTGGTCGGA CGCGGGGTCG CCTTTACGTT
TATGCCCGCA ACGGCGCGTT GGTCTGGACC GAGGTGCACC GTCGGCACGT TCAGTTGGTG
GCGGATCTTG CTGGTGTTGC GATCGAAAAC GATCAGATGC TGCAGGATGC CCGCCGGCAT
GAGCGGGTGG ATCGACAACT CAGCATCGGC GCGGAGATTC AGGCCCAGTT GTTGCCGGAC
CGTTGCCCCG TGATCGAGGG CGTTGATCTG GCCGCGCGCT GCCGGCCCGC TTTTCAGGTG
GGCGGTGATT ACTACGACTT CATTCCCACC CGTCCGGAAC TCATCGGCCG CCGCCGTGAG
CGTGGTCGCT GGGCCCTGGT GATGGGCGAT GTCATGGGCA AGGGCGTTCC AGCCGGTCTG
CTGATGACGA TGCTGCGCGG GATGCTGCGC GCTGAGGTTC TCAGCGGTCT GCCACCGGAT
CGGATTCTTC ACGACCTCAA CCAGCTGGCG CAGGAAGACC TTGCGCAGTC GCACCGGTTC
GTGACGCTGT TTTATTCCGA CCTGGATCCG CGCACGTTGC GGTTGCGTTA TGCCAATGCG
GCCCACAACC CGCCCCTGCT CTGGCGCGCC GAGCGACGGG TGATCATGCG GCTCGACGCC
GCTGGGCTCC TGATCGGTCT CCAACCTGAA GCTGAGTTCG CCCTCGGTGA GGTTCGCCTC
GAACCGGGAG ACGTGTTGCT CTATTACACC GATGGTGTCA CCGAAGCACC GGGGATCACG
GGCGATCGTT TCGACGAGGC GCGGCTGATT CGTGCCCTTG AAACGGCCTG TCGCAGCGGT
CAGGGGGCGC AGGGAATTCT GGACAGCCTG TTTGAACGCT TGGATCGTTT TGTTGGTCCG
GATCGTCAGT TGGAGGATGA CGCGTCGCTT GTGGTGCTGA AAGTTCCGGA GGCCGTCACG
TTGCCGATTG TGCAGGTACG GACAATCGCC TGA
 
Protein sequence
MSSKPPGRHP SSAQRTGNPS PEAMASLRQL FDSLSSEQRR NQDLLVSLGF ALRSFTNLQR 
FLELVPVVAS RLVGVEGALL VPFQSDGRLW RDQLQGSPAE LSQDLLQRLA AFEPGSAVGF
GSDDQQLLAL DRLVQRCLPK AALFATSVTA RGRTRGRLYV YARNGALVWT EVHRRHVQLV
ADLAGVAIEN DQMLQDARRH ERVDRQLSIG AEIQAQLLPD RCPVIEGVDL AARCRPAFQV
GGDYYDFIPT RPELIGRRRE RGRWALVMGD VMGKGVPAGL LMTMLRGMLR AEVLSGLPPD
RILHDLNQLA QEDLAQSHRF VTLFYSDLDP RTLRLRYANA AHNPPLLWRA ERRVIMRLDA
AGLLIGLQPE AEFALGEVRL EPGDVLLYYT DGVTEAPGIT GDRFDEARLI RALETACRSG
QGAQGILDSL FERLDRFVGP DRQLEDDASL VVLKVPEAVT LPIVQVRTIA