Gene Syncc9605_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0011 
Symbol 
ID3735534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp12507 
End bp14045 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content61% 
IMG OID637774594 
Productsignal recognition particle-docking protein FtsY 
Protein accessionYP_380348 
Protein GI78211569 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0552] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00064] signal recognition particle-docking protein FtsY 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTTCA ACTGGTTCGA ACGACAGGCC GAGGAGTCTC TGAAGCCGGA GCCGACGCCC 
ACCCCTGCGC CGACGCCAGA ACCGACAGAT GCTGGAACGG AAGCTCCCGT TTCAGCAGCG
CCTGAGCCGA CTCCAGCTCC CGCAGCCACT GAGGAAGAAG ACGAAGCCCT GGTTTGGGCT
CGTGAGGCCT ATGCCCGCCT GAAGGCTCAA CAACATGCTG CGGCTTCTGT CGTTGAAGTG
GCTCCCGAGT CCACCCCTGC GCCAAGTCCA GAACCAGCGC CTACACCTCC ACCAACCCCA
ACCCCAACCT CAACCCCAGG ACCGGCACCG TTACCAACGC CGTCTCTATC ACCTTTACCG
ACGCCGTCTC CAGCACCAGC CCCCGGACTG TCGCTGCTGG AGCAGGCTGC AGCACAGCGC
CAGCAGCGAC AGCAGGATCT GGATCAAAGG GCTGTTGAGG CTCCCCCTGC ACCCACGCCG
GCTCCGACCC CTGCGCCAGT TGTCGACTCA GAAGAGCCGC AGTTGGGCGA CTTTGATCAG
GATTTCACCT GGTCTGCTGA GGTGCTTGCA GCCCAGGGCC GTCGTGTCGA TCAGGTTTCC
CTCGAGGAAA TCGACTGGTT GGGTCGGCTT CGCCGCGGCC TTGAAAAGAC CCGTCAGGGC
TTTGTTACCA GCCTTCTGGA GAATCTCGGT GATGACCCGC TGACGCCGGA GGTTCTCGAT
GATCTGGAAA CTCTCCTGCT GAGAGCGGAT GCTGGCGTTC AGGCCACCGA TCAGGTGCTG
GATGCCTTGC GTCAGCGGAT GAATGAGGAG GTGGTCGACC CTGCGGAAGG GATTCGCTTT
CTGAAGGAAC AGCTGCGTGG CTTGTTGGAT GCGCCGATCC AGGCCAGTGG TGTTCCATTA
CTGGCGCCGG AACGGGATCG CCTCAACATT TGGTTGATGG TGGGGGTTAA TGGGGTTGGC
AAGACCACCA CCCTGGGAAA ACTCGCCAAC CTTGCTGTTC GCAGCGGTTA TTCGGCTCTG
ATCGCGGCCG CAGACACCTT CCGGGCTGCA GCTGTGCAGC AGGTTGAGGT CTGGGGAGAG
CGCAGTGATG TTCCGGTGGT GTCCAACCCC AGCAGCAATG CCGACCCCGC TGCCGTTGTT
TTCGATGCGA TTGGCGCCGC CCGCTCGCGT AAGTCTGATC TGCTGTTGGT GGACACTGCC
GGACGCTTGC AGACCAAGCA CAACCTGATG GAGGAGCTTC AAAAAGTCAG GAAGATCATC
GACCGTTTGG CGCCGGAGGC GAAGGTCGAA TCCTTGCTGG TTCTTGATGC AAGCCAGGGT
CAGAACGGTC TTCGCCAGGC CATGGCCTTT GCCCAGGCGG CCGGCCTCAC CGGCGTTGTG
ATCACCAAAC TCGACGGCAC GGCCCGTGGC GGAGTTGCTC TGGCGGTGTC GTCTGAGGCG
GGATTGCCGA TTCGTTTCAT CGGTGCTGGG GAAGGAATCC GCGATCTGCG CCCCTTCAAC
AGTTTCGAAT TCGTTGAGGC TCTGCTGGCT GGACGCTGA
 
Protein sequence
MVFNWFERQA EESLKPEPTP TPAPTPEPTD AGTEAPVSAA PEPTPAPAAT EEEDEALVWA 
REAYARLKAQ QHAAASVVEV APESTPAPSP EPAPTPPPTP TPTSTPGPAP LPTPSLSPLP
TPSPAPAPGL SLLEQAAAQR QQRQQDLDQR AVEAPPAPTP APTPAPVVDS EEPQLGDFDQ
DFTWSAEVLA AQGRRVDQVS LEEIDWLGRL RRGLEKTRQG FVTSLLENLG DDPLTPEVLD
DLETLLLRAD AGVQATDQVL DALRQRMNEE VVDPAEGIRF LKEQLRGLLD APIQASGVPL
LAPERDRLNI WLMVGVNGVG KTTTLGKLAN LAVRSGYSAL IAAADTFRAA AVQQVEVWGE
RSDVPVVSNP SSNADPAAVV FDAIGAARSR KSDLLLVDTA GRLQTKHNLM EELQKVRKII
DRLAPEAKVE SLLVLDASQG QNGLRQAMAF AQAAGLTGVV ITKLDGTARG GVALAVSSEA
GLPIRFIGAG EGIRDLRPFN SFEFVEALLA GR