Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0006 |
Symbol | |
ID | 3735529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 8533 |
End bp | 9414 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637774589 |
Product | hypothetical protein |
Protein accession | YP_380343 |
Protein GI | 78211564 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTCGTC GAATTGGCTT GCGTCGAACG CTGGCGGCTG CACTGGTCGT TCTGGGGAGT TGGTTTGGTG CCCCATCAGC CAACGCCCTG ATCCCCTACG TCTACTTGCC CACAGAAGAG GAGCTCAAGG GCTCGTCGAT CGGCATCGGA CGGACCGCTG CACAGCTGCT TCAGCTGGGG CAAGCCAAGG ACGCTGCACG ACTCGCGGCG CTGGCGGTGC GGCTCAACCC CAATGACGAA CGGTTCTGGT CGATCCTGGC GGAGGCTCAA CTCCGCAACA ACAACCTCCA GGATGCAAGC CGATCTCTGG CCCGCGCCAA GCAGCTGAAT CCCGAAAAGG CAGGTCTGTG GTTCGCCGAA GCGGCGATCG CATTGCGGGC AGAACGACCG GATTATGCCG TTCCCTTGAT CACCCGCGGA CTGCAATTGG ATCCGGACAA CGCTCCGGCC TATTTCGACC TCGGCAACGC CAGGATCATG CAGGGCGAAC TCCCTCTGGC CCTGAAATCA TTCGAAAGAG CCACCGCTCT GAAGCCGGAG TTCTGGGAAG CCCTGAACAA CCAAGCCCTG GTGCTTTTTG AGATGGGCCA GCGTCAGGAG GCTGTACGAC GTTGGCGCCG CGTGTTGAAG CTGGAGAACA ACGCAGAACC GATGCTGGCC CTGGCCGCAG CTCTGCATCA ACGGTGTGAG CAGAGCGAAG CGATCCAGCT TGCGGCCACA GCGTTGGCCA AGAATCCCAA CTACGTCTTG CCCCTGCATC AAGCGGAACA GCTTTGGGGG GTGCGCATCC GTCAGGCGAC GGCACAATTG CTGAGCGAGC CGCAGCTCAC CAACAGCGTG GAACGAGCCC AAGCCAACGC AACGTGGAAG AAAAACCAGT GA
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Protein sequence | MLRRIGLRRT LAAALVVLGS WFGAPSANAL IPYVYLPTEE ELKGSSIGIG RTAAQLLQLG QAKDAARLAA LAVRLNPNDE RFWSILAEAQ LRNNNLQDAS RSLARAKQLN PEKAGLWFAE AAIALRAERP DYAVPLITRG LQLDPDNAPA YFDLGNARIM QGELPLALKS FERATALKPE FWEALNNQAL VLFEMGQRQE AVRRWRRVLK LENNAEPMLA LAAALHQRCE QSEAIQLAAT ALAKNPNYVL PLHQAEQLWG VRIRQATAQL LSEPQLTNSV ERAQANATWK KNQ
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