Gene Syncc9605_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0005 
Symbol 
ID3735528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp6019 
End bp8487 
Gene Length2469 bp 
Protein Length822 aa 
Translation table11 
GC content61% 
IMG OID637774588 
ProductDNA topoisomerase IV subunit A 
Protein accessionYP_380342 
Protein GI78211563 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.793608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGG AGCGCGTTCA ACCGATCGCC CTGCATCAGG AGATGCAGCG CTCCTACCTC 
GAATACGCGA TGAGCGTGAT CGTGGGTCGG GCCTTGCCCG ATGCCCGCGA TGGTCTCAAA
CCCGTCCAAC GACGCATCCT CTACGCGATG CAGGAACTGG GGCTGACCCC AGACCGTCCA
TACCGCAAAT GCGCAAGGGT CGTTGGTGAT GTTCTGGGCA AGTACCACCC CCACGGTGAT
CAGGCGGTCT ATGACGCCCT GGTGCGGCTT GTTCAGACGT TCTCCAGCCG TCATCCCCTG
CTCGATGGCC ACGGCAATTT CGGCTCGGTG GACGACGACC CACCGGCGGC GATGCGGTAC
ACAGAAACCC GTCTGGCACC CATCTCCCAT CAAGCAATGC TTGAGGAGAT TGGTGAGGAC
ACGGTTGATT TTGCGCCGAA CTTCGATGGG TCCCAACAGG AACCCACCGT TCTTCCGGCC
CAGCTTCCCT TCCTGCTGCT GAACGGCTGC TCTGGCATCG CCGTCGGCAT GGCGACCAGC
ATCCCTCCTC ACAATTTGGG AGAAGTTGTG GATGGTCTGG TCGCCCTGAT CCGCAAGCCG
GAGCTGAGTG ACGAGAAACT GCTGGAACTG ATCCCGGGAC CCGACTTCCC CACCGGCGGT
GAAGTGCTGA TCAGTTCAGG CCTGCGGGAC ACCTACCTGC ATGGCCGCGG CAGCATCCCC
ATGCGCGGCG TCGCCCACAC CGAAGAGGTG CAACCCGGCA AAGGGCGCCA CAAACGAAAT
GCCGTTGTGG TCACGGAACT GCCCTATCAG CTCAGCAAGG CCGGCTGGAT TGAAAAACTG
GCGGAATCCG TCAACGACGG AAAAATCGGC GGAATCGCCG ACATCCGCGA CGAAAGCGAC
CGCGAGGGCA TGCGCGTGGT GGTGGAGCTG CGCCGCGATG CAGATCCGGG GAAGGTGCTG
AAGGATCTGC AGCGTCGAAC AGCGCTGCAG AGCAACTTCG GAGCCATCCT GCTGGCCCTG
GTGGATGGAC AACCCCAGCA GCTTTCGCTG CGCCAACTGC TGCAGACCTT CCTTGATTTC
AGGGAACTGA CCCTGATCCG GCGCACCAGT CATGCCCTGC GCAAGACCGA AGACCGGCTT
GAGGTTGTGG AAGGGCTGAT CACAGCCCTG AACAATCTTC AGGCCGTGAT CGCCATGATC
CAGGAGGCAA ATGACGCCGC CTCAGCCCGC GCCAGCCTGA TGGTGCGCCT CGACCTCAGC
GAACGTCAGG CCGATGCGGT GTTGGCCATG CCCCTGAGGC GCCTGACCGG ACTCGAACAG
GAAAGCCTGC GCCAGGAGTT GGATGAGCTT CGGGCGAAAC GTCAACGCCT CAAGTTGCTC
CTGGACAACC GGGACCAACT GCTGGACGCG ATGGTGACGG AACTCAAAGG ATTGAAAAAA
CGCTTCAGCA CCCCGCGGCG AACACGCTTG GTGGAAGGCG GTGATGCCCT TATGGCCGAA
CGAGCGGCCA GCCAACGCCC GAACACAGAA CTGCTGCGTC AGCAGGCCCT GGCTGCACTG
CCCGGAGATG GTCGGGTGCT GATCCAGGCC GATGGACAAG TGAAAATCTT CACCCCCCAG
GTGCTGGGCC GGCTGCACCT CAATGATCCC TGCCCCGTTG GTGATGCACC ATCTCCCGCA
CGGGTAATCC TGCCCATCGA ACCACCACCG CGACTGCTGG CGGTGAGCGC AGGGGGACGC
ATCGCCCAGG TGCGCTGGGA ATTTGCCGGC CAGCAACCCG GCCCAATTGA CCGTTTCCTG
CCCACGGGCC TGGATGGCGA CCCTATCGTT TCGCTGCTGT CTCTGCCCAG CCAAAACATC
GATGAATTGA GTCTCGGCTT GCTCAGCAGC GATGGACGCT TTAAGCGCCT CCCCGTCAGT
GAAGTGGTGG ACCTTTCCGG TCGAGCCACC AGCGTTCTTA AGTTGAAAGA GGGCGTTGAG
CTCAATAACG CGGTGATCTG TCGCAACCAG GGAACACTGG TGCTGATCAG CGACATCGGT
CGCCTGTTGC GGCTGCGCAT CAACGAAGAA TCCCTGCCGC TGATGGGTCG GTTGGCGCAG
GGACCCATGA CCATGCGATT GCTCCCCGGA GAACAGATCG TCGGAGCCGT CTGCACGGAA
CAGGCACCAC TGATGCTGTT CAGTCAGCGG GGAATGATCG GCCGCATCGA TTGTTCAGGC
ATGCGCTACA ACCAGCGGGG CGATCTCGGC AGCATGGCGG TGCAGGTTGA TGCGGAATCA
GATCGCCTTG TGGGAGTCAG CGCTGGACCA GGTCTTGTGG GTGTGCGCAC CAGCAAGGAC
CGTCACGGAC GCTTGAATCC GGACAACATC ACCATCTCAA AACCCGGAGA CAAACTGATG
GAGAAAATGT CTCTTCAGAG CGGAGAAACC ATCGTTGAAG TGATCAACGC CATTCAACCG
AATCCCTGA
 
Protein sequence
MAEERVQPIA LHQEMQRSYL EYAMSVIVGR ALPDARDGLK PVQRRILYAM QELGLTPDRP 
YRKCARVVGD VLGKYHPHGD QAVYDALVRL VQTFSSRHPL LDGHGNFGSV DDDPPAAMRY
TETRLAPISH QAMLEEIGED TVDFAPNFDG SQQEPTVLPA QLPFLLLNGC SGIAVGMATS
IPPHNLGEVV DGLVALIRKP ELSDEKLLEL IPGPDFPTGG EVLISSGLRD TYLHGRGSIP
MRGVAHTEEV QPGKGRHKRN AVVVTELPYQ LSKAGWIEKL AESVNDGKIG GIADIRDESD
REGMRVVVEL RRDADPGKVL KDLQRRTALQ SNFGAILLAL VDGQPQQLSL RQLLQTFLDF
RELTLIRRTS HALRKTEDRL EVVEGLITAL NNLQAVIAMI QEANDAASAR ASLMVRLDLS
ERQADAVLAM PLRRLTGLEQ ESLRQELDEL RAKRQRLKLL LDNRDQLLDA MVTELKGLKK
RFSTPRRTRL VEGGDALMAE RAASQRPNTE LLRQQALAAL PGDGRVLIQA DGQVKIFTPQ
VLGRLHLNDP CPVGDAPSPA RVILPIEPPP RLLAVSAGGR IAQVRWEFAG QQPGPIDRFL
PTGLDGDPIV SLLSLPSQNI DELSLGLLSS DGRFKRLPVS EVVDLSGRAT SVLKLKEGVE
LNNAVICRNQ GTLVLISDIG RLLRLRINEE SLPLMGRLAQ GPMTMRLLPG EQIVGAVCTE
QAPLMLFSQR GMIGRIDCSG MRYNQRGDLG SMAVQVDAES DRLVGVSAGP GLVGVRTSKD
RHGRLNPDNI TISKPGDKLM EKMSLQSGET IVEVINAIQP NP