Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0005 |
Symbol | |
ID | 3735528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 6019 |
End bp | 8487 |
Gene Length | 2469 bp |
Protein Length | 822 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637774588 |
Product | DNA topoisomerase IV subunit A |
Protein accession | YP_380342 |
Protein GI | 78211563 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.793608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAGG AGCGCGTTCA ACCGATCGCC CTGCATCAGG AGATGCAGCG CTCCTACCTC GAATACGCGA TGAGCGTGAT CGTGGGTCGG GCCTTGCCCG ATGCCCGCGA TGGTCTCAAA CCCGTCCAAC GACGCATCCT CTACGCGATG CAGGAACTGG GGCTGACCCC AGACCGTCCA TACCGCAAAT GCGCAAGGGT CGTTGGTGAT GTTCTGGGCA AGTACCACCC CCACGGTGAT CAGGCGGTCT ATGACGCCCT GGTGCGGCTT GTTCAGACGT TCTCCAGCCG TCATCCCCTG CTCGATGGCC ACGGCAATTT CGGCTCGGTG GACGACGACC CACCGGCGGC GATGCGGTAC ACAGAAACCC GTCTGGCACC CATCTCCCAT CAAGCAATGC TTGAGGAGAT TGGTGAGGAC ACGGTTGATT TTGCGCCGAA CTTCGATGGG TCCCAACAGG AACCCACCGT TCTTCCGGCC CAGCTTCCCT TCCTGCTGCT GAACGGCTGC TCTGGCATCG CCGTCGGCAT GGCGACCAGC ATCCCTCCTC ACAATTTGGG AGAAGTTGTG GATGGTCTGG TCGCCCTGAT CCGCAAGCCG GAGCTGAGTG ACGAGAAACT GCTGGAACTG ATCCCGGGAC CCGACTTCCC CACCGGCGGT GAAGTGCTGA TCAGTTCAGG CCTGCGGGAC ACCTACCTGC ATGGCCGCGG CAGCATCCCC ATGCGCGGCG TCGCCCACAC CGAAGAGGTG CAACCCGGCA AAGGGCGCCA CAAACGAAAT GCCGTTGTGG TCACGGAACT GCCCTATCAG CTCAGCAAGG CCGGCTGGAT TGAAAAACTG GCGGAATCCG TCAACGACGG AAAAATCGGC GGAATCGCCG ACATCCGCGA CGAAAGCGAC CGCGAGGGCA TGCGCGTGGT GGTGGAGCTG CGCCGCGATG CAGATCCGGG GAAGGTGCTG AAGGATCTGC AGCGTCGAAC AGCGCTGCAG AGCAACTTCG GAGCCATCCT GCTGGCCCTG GTGGATGGAC AACCCCAGCA GCTTTCGCTG CGCCAACTGC TGCAGACCTT CCTTGATTTC AGGGAACTGA CCCTGATCCG GCGCACCAGT CATGCCCTGC GCAAGACCGA AGACCGGCTT GAGGTTGTGG AAGGGCTGAT CACAGCCCTG AACAATCTTC AGGCCGTGAT CGCCATGATC CAGGAGGCAA ATGACGCCGC CTCAGCCCGC GCCAGCCTGA TGGTGCGCCT CGACCTCAGC GAACGTCAGG CCGATGCGGT GTTGGCCATG CCCCTGAGGC GCCTGACCGG ACTCGAACAG GAAAGCCTGC GCCAGGAGTT GGATGAGCTT CGGGCGAAAC GTCAACGCCT CAAGTTGCTC CTGGACAACC GGGACCAACT GCTGGACGCG ATGGTGACGG AACTCAAAGG ATTGAAAAAA CGCTTCAGCA CCCCGCGGCG AACACGCTTG GTGGAAGGCG GTGATGCCCT TATGGCCGAA CGAGCGGCCA GCCAACGCCC GAACACAGAA CTGCTGCGTC AGCAGGCCCT GGCTGCACTG CCCGGAGATG GTCGGGTGCT GATCCAGGCC GATGGACAAG TGAAAATCTT CACCCCCCAG GTGCTGGGCC GGCTGCACCT CAATGATCCC TGCCCCGTTG GTGATGCACC ATCTCCCGCA CGGGTAATCC TGCCCATCGA ACCACCACCG CGACTGCTGG CGGTGAGCGC AGGGGGACGC ATCGCCCAGG TGCGCTGGGA ATTTGCCGGC CAGCAACCCG GCCCAATTGA CCGTTTCCTG CCCACGGGCC TGGATGGCGA CCCTATCGTT TCGCTGCTGT CTCTGCCCAG CCAAAACATC GATGAATTGA GTCTCGGCTT GCTCAGCAGC GATGGACGCT TTAAGCGCCT CCCCGTCAGT GAAGTGGTGG ACCTTTCCGG TCGAGCCACC AGCGTTCTTA AGTTGAAAGA GGGCGTTGAG CTCAATAACG CGGTGATCTG TCGCAACCAG GGAACACTGG TGCTGATCAG CGACATCGGT CGCCTGTTGC GGCTGCGCAT CAACGAAGAA TCCCTGCCGC TGATGGGTCG GTTGGCGCAG GGACCCATGA CCATGCGATT GCTCCCCGGA GAACAGATCG TCGGAGCCGT CTGCACGGAA CAGGCACCAC TGATGCTGTT CAGTCAGCGG GGAATGATCG GCCGCATCGA TTGTTCAGGC ATGCGCTACA ACCAGCGGGG CGATCTCGGC AGCATGGCGG TGCAGGTTGA TGCGGAATCA GATCGCCTTG TGGGAGTCAG CGCTGGACCA GGTCTTGTGG GTGTGCGCAC CAGCAAGGAC CGTCACGGAC GCTTGAATCC GGACAACATC ACCATCTCAA AACCCGGAGA CAAACTGATG GAGAAAATGT CTCTTCAGAG CGGAGAAACC ATCGTTGAAG TGATCAACGC CATTCAACCG AATCCCTGA
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Protein sequence | MAEERVQPIA LHQEMQRSYL EYAMSVIVGR ALPDARDGLK PVQRRILYAM QELGLTPDRP YRKCARVVGD VLGKYHPHGD QAVYDALVRL VQTFSSRHPL LDGHGNFGSV DDDPPAAMRY TETRLAPISH QAMLEEIGED TVDFAPNFDG SQQEPTVLPA QLPFLLLNGC SGIAVGMATS IPPHNLGEVV DGLVALIRKP ELSDEKLLEL IPGPDFPTGG EVLISSGLRD TYLHGRGSIP MRGVAHTEEV QPGKGRHKRN AVVVTELPYQ LSKAGWIEKL AESVNDGKIG GIADIRDESD REGMRVVVEL RRDADPGKVL KDLQRRTALQ SNFGAILLAL VDGQPQQLSL RQLLQTFLDF RELTLIRRTS HALRKTEDRL EVVEGLITAL NNLQAVIAMI QEANDAASAR ASLMVRLDLS ERQADAVLAM PLRRLTGLEQ ESLRQELDEL RAKRQRLKLL LDNRDQLLDA MVTELKGLKK RFSTPRRTRL VEGGDALMAE RAASQRPNTE LLRQQALAAL PGDGRVLIQA DGQVKIFTPQ VLGRLHLNDP CPVGDAPSPA RVILPIEPPP RLLAVSAGGR IAQVRWEFAG QQPGPIDRFL PTGLDGDPIV SLLSLPSQNI DELSLGLLSS DGRFKRLPVS EVVDLSGRAT SVLKLKEGVE LNNAVICRNQ GTLVLISDIG RLLRLRINEE SLPLMGRLAQ GPMTMRLLPG EQIVGAVCTE QAPLMLFSQR GMIGRIDCSG MRYNQRGDLG SMAVQVDAES DRLVGVSAGP GLVGVRTSKD RHGRLNPDNI TISKPGDKLM EKMSLQSGET IVEVINAIQP NP
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