| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_A3573 |
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| Symbol | |
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| ID | 3738011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007515 |
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| Strand | - |
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| Start bp | 7043 |
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| End bp | 8494 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637774579 |
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| Product | Type IV secretory pathway TrbL components-like |
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| Protein accession | YP_380333 |
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| Protein GI | 78214262 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 122 |
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| Plasmid unclonability p-value | 0.0464734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACCG CAACCCCAGA TGTTCAAATT CTCACCCAGG TACTTGAAAC CTTTAACTCC
GTTTTTGGGA CCGGCAAAGG GGCCTTGCTG TCATGGGCCA TGTATATTGC CGGAGCCCTG
GCAGTAATCG AAATGGTCCT CTTGGGGGCA TTTCATGCCC TGAAGGGGGG GGAAGACAAC
ATAATCCCCC CATTGGTTAA AAAGATCCTC ACCATCGGTT TTTTCATTTT TCTGGTTCAA
GGGGTCGCCC GTTCCGGCCT CGCTGAAATC ATCCTTGACG GCTTTATTGC GGTAGGTTTG
AAGGCCGGAG GGGCGGGGGT ATCCTTTTCC ATGAAAAACC CTTCGTCCTT GATTTCGGCG
GGCTTTCTGG CTGCTGATCC AATCTATGAC GCTATACAAC ACATGGCTAT AACTGCAATC
GGTGACAGGC TCATGGCTTA CGGCTGTTAT CTAATTGTGA TTCTGGCTTA TGTCGTCATG
GCGTGTCAGA TAATGATTAC CTTCATCGAA TTTGGCATCG TTTCCACCCT TGGTATCATC
CTTCTCCCCT TCGGAATCAG TAAGCACACC GCGTTTTTGT CGGAAAAGGC CATCGGCGCA
ATAATCGCCT TCGGGATCAA GTTAATGGTT TTGTCATTCG TGGTGGCGGT GATCCAGCCG
GTCCTTTTGG CTCTCCCGGC TCTTGGGCCT GATCCAACGT TTAATCAAAT GATGACATTA
GGTGTAACGG TGGCCGTTAT TGCCTTTGTG GTTGCCCAGG CCCCCGGTGT GGCTTCCGCC
GTCCTTTCCG GGTCCCCTTC CCTGTCCGCC GGAGCCGCCG CCGGTACCGC CTTGAGTGCC
GCCGCAGGGG CAGCAGCACC AGCCATGGCC GCCGCTGGTA TGGCAACCGG AGGGGCAGCA
GTAGCCGGAG GCCTCGCCGG AGCCAAGGCC GCAGCAGCAG CCGGGAACGG CTCTTTCCTT
GGCAACGTTG CCCGAGCCGC AGCAGGAGCA ATGCCCGGAG CGTCCGCGTT CCAGGCCGCC
AAGAGCGGGG CCATTTCAGC CGCCGAAGCC GGGAGCGCCG GAGGGATCAA ACCGGCATCG
GGAGGCAGCA GCCTTAAACC GGCCGCCGAT GCAGCAGCCA AAGGAGCAGC AGACACCGGG
AAGACTGAGG CCACCCCCAC ACCGGCACCG GCAGCAGACA CCACCGCTAC AACCACAGAC
GCCACACCCC CGGCGACTGG CAGCGCAGAC ACCACCGCAA CCGATGCCGG GAAGACCGAA
CCAGCGCCGA CCACGGGGAC CGGCGGAGGC ACCAGCAGCT TGCAAGGGTC CAACGTCGGA
AGCGGAGGGG GGAACGGTAA GGGCCAACCC CGCCGGAGCA GCCTACAAGA CGCATGGCAG
CAGAGCCAAA GAGCAGTTCC CCAGGACGCC AGCGCCGGAG GCGGGGCAGG GGTCCGGCTC
CACGTCGATT AA
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| Protein sequence | MATATPDVQI LTQVLETFNS VFGTGKGALL SWAMYIAGAL AVIEMVLLGA FHALKGGEDN
IIPPLVKKIL TIGFFIFLVQ GVARSGLAEI ILDGFIAVGL KAGGAGVSFS MKNPSSLISA
GFLAADPIYD AIQHMAITAI GDRLMAYGCY LIVILAYVVM ACQIMITFIE FGIVSTLGII
LLPFGISKHT AFLSEKAIGA IIAFGIKLMV LSFVVAVIQP VLLALPALGP DPTFNQMMTL
GVTVAVIAFV VAQAPGVASA VLSGSPSLSA GAAAGTALSA AAGAAAPAMA AAGMATGGAA
VAGGLAGAKA AAAAGNGSFL GNVARAAAGA MPGASAFQAA KSGAISAAEA GSAGGIKPAS
GGSSLKPAAD AAAKGAADTG KTEATPTPAP AADTTATTTD ATPPATGSAD TTATDAGKTE
PAPTTGTGGG TSSLQGSNVG SGGGNGKGQP RRSSLQDAWQ QSQRAVPQDA SAGGGAGVRL
HVD
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