| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_A3572 |
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| Symbol | |
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| ID | 3738023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007515 |
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| Strand | - |
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| Start bp | 6237 |
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| End bp | 6956 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637774578 |
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| Product | conjugal transfer TrbJ signal peptide protein |
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| Protein accession | YP_380332 |
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| Protein GI | 78214261 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 167 |
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| Plasmid unclonability p-value | 0.0000309326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG CACTTATTGT CACCGTCCTG ATCCTGAGCA TGTCCGCCCA GGCTCATGCA
ACAATCCCGG TGCTCGATTA CACCAACTGG GCACAGAACC TGTTTAGCTA CGTGCAGCAG
GTAGCCACGG CCATCAACAC CGCCGAGCAA CTAGCCACTC AATACCAGCA ACTTGAAGTT
GCCATACGAC AGGCCCGGCA ACTCAACAGC GACCAGATAC GCGGCCGGAT CATGAACGGC
ATTCGGCAGC TTGCCGAAAT CCAGCAGAAG ACCAGGGGCA TTACTTACGA TTACGGCCGC
ACGGAGGGGG CTTTTGACCA GTATTACCCG GACATGGCCG CCTACAACGG CATGAGCGGG
AAGGACTACG CCGCCCAGGC CGCCAAGGCA AACCAGCAGC TTCAAAACTC CGTCCGTGAC
GCCATGTTGG CCCAGGGCCT TATCAGCAAC GCCGCTACCG ATCAAGACGC CCTCAACGCC
CTTGTCGCCG CTTCCAACAG CGCAGACGGC CAGCTTGCCG CCGCCCAGGC GGGCAACCAG
ATTTCGGCAA TGGTGGCGCA ACAACTCATC CAGCTACAGC AGATCATGGC AACAAGTGCC
CGTGAACAAT CGTCCTACAT GGCCGCCCAG GCCGCCGAAA AGGCAAAGCC CCTCAAGAAA
GGGGACTTAC CAAAGGGGGA CGATAGAAAC ATGCTCGACT ATCTCAGGAA GAAAAAATAA
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| Protein sequence | MKKALIVTVL ILSMSAQAHA TIPVLDYTNW AQNLFSYVQQ VATAINTAEQ LATQYQQLEV
AIRQARQLNS DQIRGRIMNG IRQLAEIQQK TRGITYDYGR TEGAFDQYYP DMAAYNGMSG
KDYAAQAAKA NQQLQNSVRD AMLAQGLISN AATDQDALNA LVAASNSADG QLAAAQAGNQ
ISAMVAQQLI QLQQIMATSA REQSSYMAAQ AAEKAKPLKK GDLPKGDDRN MLDYLRKKK
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