Gene Cag_2022 details

Gene Information

• Locus tag: Cag_2022
• ID: 3747995
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: -
• Start bp: 2561520
• End bp: 2562140
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637774559
• Product: NLP/P60 family protein
• Protein accession: YP_380313
• Protein GI: 78189975
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0791] Cell wall-associated hydrolases (invasion-associated proteins)

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTTCC AGCCATTCCC TAAAAACACC CCATGGCGTT TCCCACGAAT CAGCGGGCTT 
TGGCTTGTAA GTACGGCGTT GATACTTCTT ATAAGTATCA GCGGATGCCA AAGTTATTGG 
GTTAGAACAA AGTATCATAT TGAATCGAAA TATAGCTCAA AAAAGCGAAA ATCGCATAGT 
GCGCGCCTTG CTCCCAATGG AGGCTATCAG TTTGCGCAAC CATTACCTAT GCGCCTTTCG 
CAAAGTGCTA TGGCGAGCTT TTTAAGCGAG GTTGAACAAT TGCGAGGCAC CCGTTACCGT 
AGCGGCGGTT GTTCGCCTGA CGGCTTTGAT TGCTCGGGTT TGGTCTGCTA CCTTATGAAG 
CGCCATTTTG GGTTACTTCT GCCCCGCTCT TCAGCCGATA TGGCTACGCA TGGCGTGATG 
ATAAGTAGCA CTTCAGCCCT ACAAAAAGGG GATTTACTCT TTTTTAGTAT TGACGGGCGA 
ACGATTGACC ACGTTGGTAT TGTAACGGGA TGGAATCGCT TTGTTCATGC TGCCACAAGT 
GGCGTTCGCG AAGATTATAT AAGCAGTAGT TATTATCGTG AGCGCTTTGC CTTTGGTGCT 
CGTTTACTTA TTGCTGAATA A 

 

Protein sequence

MNFQPFPKNT PWRFPRISGL WLVSTALILL ISISGCQSYW VRTKYHIESK YSSKKRKSHS 
ARLAPNGGYQ FAQPLPMRLS QSAMASFLSE VEQLRGTRYR SGGCSPDGFD CSGLVCYLMK 
RHFGLLLPRS SADMATHGVM ISSTSALQKG DLLFFSIDGR TIDHVGIVTG WNRFVHAATS 
GVREDYISSS YYRERFAFGA RLLIAE