Gene Cag_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_2021 
SymbolprmA 
ID3747994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp2560587 
End bp2561453 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content46% 
IMG OID637774558 
Productribosomal protein L11 methyltransferase 
Protein accessionYP_380312 
Protein GI78189974 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2264] Ribosomal protein L11 methylase 
TIGRFAM ID[TIGR00406] ribosomal protein L11 methyltransferase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACACA TCGGAAAGCA ACCATACATT GAAATAGCCT TTACCATTGA GGCTGAACAC 
CATGAAATGT GCATTGCATT GCTTGCCAGC GAAGGTGTAG AATCCTTTTT AGAGGAAGAT
CAGCGCTTGC TCGCCTACGT TCCGCAAAGC GCATGGTCGG AAGAAAAAAA GCAAGCCATT
ACCATTGCTC TCGATAATTG GCTGGGGCAG GTGCCGCCCA TGCACGTCAA CGTTATTGCC
GATAGAAATT GGAATGAAGA GTGGGAAGCA ACACTTGAGC CGATTGAAAT TTCTGACCGC
TTGCTCATTG TGCAAAACAA TAAGCAAATC ACCCCAAAAG AGGGGCAAAT GGTTATTTCC
ATTAACCCAA AAATGTCGTT TGGCACAGGT TACCATGCCA CAACTCGCTT AATGCTGCGC
CAAATGGAGG AGCTTGCATT GGCAGATAAG CGCATTATGG ATATTGGAAC GGGTACGGGC
GTGCTTGCTA TTGCCGCCCG CAAAATGGGC AATCAGTATC CTATTTTTGC CTTCGATAAC
AATACGTGGT CGGTTGAAAA TGCGGTTGAA AATTGTGAGG TCAATCAAAC GGCAGATATT
GCCATTCACT TGCTTGATGC CGAAGAGGAG TTAGTAAGCG AATTGCGCAA TGGCTACAAT
TTGATTTTAG CCAACATTAA TAAAAATGTG CTCGACCGCA TTTTGCCGGT GCTGCGCTCT
GCTGCCCCAA CGGCTACGGT GCTGCTATCG GGCGTGCTAA CGTATGATGA AGCGTGGTTA
AAAAAGCTCT GCAAAAAGCT TGGGTACGAT ATTGCGAAAA CGTTGTATGA GGATGAATGG
CTTTCGGCGT TATTGGTGGG AAAATGA
 
Protein sequence
MPHIGKQPYI EIAFTIEAEH HEMCIALLAS EGVESFLEED QRLLAYVPQS AWSEEKKQAI 
TIALDNWLGQ VPPMHVNVIA DRNWNEEWEA TLEPIEISDR LLIVQNNKQI TPKEGQMVIS
INPKMSFGTG YHATTRLMLR QMEELALADK RIMDIGTGTG VLAIAARKMG NQYPIFAFDN
NTWSVENAVE NCEVNQTADI AIHLLDAEEE LVSELRNGYN LILANINKNV LDRILPVLRS
AAPTATVLLS GVLTYDEAWL KKLCKKLGYD IAKTLYEDEW LSALLVGK