Gene Cag_2006 details

Gene Information

• Locus tag: Cag_2006
• ID: 3747116
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: +
• Start bp: 2542881
• End bp: 2544746
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637774543
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_380297
• Protein GI: 78189959
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0811318
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATGATG TCATTGTAGT TGGGGCTGGT CATGCGGGAT GCGAAGCCAT TCTTGCGGCT 
GCACGTATGG GGGCAACCTG CTTGCTTATA ACTTCCGACC TTACGGCAAT TGCTCGCATG 
TCGTGCAACC CAGCTATTGG TGGTATGGCA AAGGGGCAAA TCACTCGCGA GATTGATGCG 
CTTGGTGGAG AAATGGCGAA GGCAATTGAT GCAACAGGTA TTCAATTCCG TTTGCTGAAT 
CGCAGCAAGG GTCCAGCGAT GCACTCACCA CGCGCACAAG CTGACCGCAC CTTGTACTCA 
CTCTACATGC GCACCATCAT TGAGCGAGAG CCAAACATTG ATTTACTACA AGACACCGTT 
ATAGCAATTG AAACAAAAGG GGAGTGCTTT GCAGGAGTAA GAATTACTTC GAGCAGAGTT 
ATTGAAGGCA AGAGCGCCAT ATTAACGTGT GGCACTTTTT TGAATGGATT GATTCATGTT 
GGCATGAACC ATTTTGCGGG AGGGCGCACT ATTGCCGAAC CACCTGTTGT GGGGTTAACA 
GAAAATCTTT GCGCACATGG TTTTCAAGCG GGGCGATTGA AAACAGGCAC ACCACCTCGC 
ATTGATAGCC GCAGCATTGA TTACCGTAAA GTTGATGAGC AACCTGGCGA TATTGAGCCA 
ATCTTATTTT CCTTTGAAAG TAAAGGTGCC TTACAAAGCA AGCAGGTAAG TTGTTTTATT 
ACCAAGACCA CCGAAGAGAC GCACGCAATT TTACGCAAAG GTTTTGAGCG CTCGCCGCTT 
TTTACGGGAA AGGTGCAGGG CATAGGTCCT CGCTACTGCC CATCGGTAGA GGATAAAATT 
TTCCGTTTCC CTGACAAAAA TAGCCACCAT ATTTTTCTTG AGCCAGAAGG GATAGATACC 
AATGAGATGT ATGTGAATGG CTTTTCAACC TCGCTGCCTG AAGATATTCA GCTTGAAGGG 
TTGCACTCCA TTCCCGGACT TGAGCAGGTA AAAATGATTC GACCGGGCTA TGCTATTGAG 
TACGATTATT TTTATCCCCA TCAAATTCAA GCTACCCTTG AAACAAGGCT CATTGAAAAT 
CTTTACTTTG CAGGACAAAT TAATGGCACA TCGGGCTATG AAGAGGCGGC TGCACAAGGC 
TTAATGGCTG GTATTAATGC CGTCTTAAAA ATGCGGAAGC ATGAGCCGTT AATACTTACT 
CGCTCCGATG CTTACATTGG TGTTTTAATT GACGACCTCA TTACAAAGGA GACTAATGAG 
CCTTACCGGA TGTTCACCTC ATCGGCTGAG CACCGTTTGT TGCTGCGCCA CGACAACGCC 
GATATTCGCT TGCACGAATT TGGCTACCGA GTTGGGTTAC TGCCTGAACA TCGCTATCAA 
GCTACTCGTC AAAAAATTGA GCAAATTAAT GCCGTTAAAA CTCTTTTATC GCAAATTCGT 
CTTGAGAGTG GTTTAGCAAA CAAGCTACTA CAAGAGTTAG AATATGGGGA AGTAACGGGT 
GCTCAACAAG TTACCACGCT TCTGAAACGT CCGAGGGTTA CACTTGCCAA GCTGCTTGCA 
ACTTCACCCG AACTGCACAG TCAATTAAGC AATATCAGCA ATAATCCGCT TGTCTATGAA 
CAGGTGGAAA TTGATTGTAA GTATGAAGGC TATCTCAAAC GGGATGCCTT AGTAGCCGAA 
AAAATTCAAC GCCTTGAAGC GCACCACATT CCAGCTTTGT TAGATTACCA TGCAATAGCA 
GGGCTTTCAA ACGAAGGACG TGAAAAGCTG AAAAAACATC GCCCAGAAAA TATTGGGCAG 
GCATCACGAA TACTTGGTGT TTCGCCATCC GATATTTCAA TCTTGATGGT TCATCTTGGG 
CGCTAA 

 

Protein sequence

MYDVIVVGAG HAGCEAILAA ARMGATCLLI TSDLTAIARM SCNPAIGGMA KGQITREIDA 
LGGEMAKAID ATGIQFRLLN RSKGPAMHSP RAQADRTLYS LYMRTIIERE PNIDLLQDTV 
IAIETKGECF AGVRITSSRV IEGKSAILTC GTFLNGLIHV GMNHFAGGRT IAEPPVVGLT 
ENLCAHGFQA GRLKTGTPPR IDSRSIDYRK VDEQPGDIEP ILFSFESKGA LQSKQVSCFI 
TKTTEETHAI LRKGFERSPL FTGKVQGIGP RYCPSVEDKI FRFPDKNSHH IFLEPEGIDT 
NEMYVNGFST SLPEDIQLEG LHSIPGLEQV KMIRPGYAIE YDYFYPHQIQ ATLETRLIEN 
LYFAGQINGT SGYEEAAAQG LMAGINAVLK MRKHEPLILT RSDAYIGVLI DDLITKETNE 
PYRMFTSSAE HRLLLRHDNA DIRLHEFGYR VGLLPEHRYQ ATRQKIEQIN AVKTLLSQIR 
LESGLANKLL QELEYGEVTG AQQVTTLLKR PRVTLAKLLA TSPELHSQLS NISNNPLVYE 
QVEIDCKYEG YLKRDALVAE KIQRLEAHHI PALLDYHAIA GLSNEGREKL KKHRPENIGQ 
ASRILGVSPS DISILMVHLG R