Gene Cag_2002 details

Gene Information

• Locus tag: Cag_2002
• ID: 3747112
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: +
• Start bp: 2538602
• End bp: 2539081
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637774539
• Product: ferric uptake regulator family protein
• Protein accession: YP_380293
• Protein GI: 78189955
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0735] Fe2+/Zn2+ uptake regulation proteins

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.0758566
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGCGCA AATTTTCCTC CCCTATATTA GAGCGTTATG TTGCTTTTTG TTTAGAGCAT 
GGATTAAAAA TTACGCCCCA ACGCTCTGCT ATTTATAGAG TGATGATGGA ATCAACCGAT 
CATCCTTGCA CAGAGGTTGT TTTTCGCCGC GTCTTGGCTT ACTACCCAGC CATGTCGTTC 
GACACGGTGA ATAGATCCCT TTTAACGTTT GCGGAACTTG GGCTGATTGA TATTGTTGAA 
TCAGTGTCGG GTGTGCGTCG CTACGATCCC AACGTGGAGC GCCATCACCA TTTGCATTGC 
ATAAAATGTG GCACTATTGT GGATTTTTGC CATCCCGATT TTGATGCCAT TCCTGCGCCA 
CCTGCGATAA CCGAAAACTT TACCATTTTA GGCAAACGGG TGATTTTTAG CGGTATTTGT 
AGCTTATGCG CTGCCAATGC GGCAACACAA GCAACGGAAG AAATAGCCAT GGAGTCGTAA 

 

Protein sequence

MRRKFSSPIL ERYVAFCLEH GLKITPQRSA IYRVMMESTD HPCTEVVFRR VLAYYPAMSF 
DTVNRSLLTF AELGLIDIVE SVSGVRRYDP NVERHHHLHC IKCGTIVDFC HPDFDAIPAP 
PAITENFTIL GKRVIFSGIC SLCAANAATQ ATEEIAMES