| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_2000 |
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| Symbol | |
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| ID | 3747110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 2535074 |
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| End bp | 2537176 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637774537 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_380291 |
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| Protein GI | 78189953 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain
[COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.255571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCATCA CCCACTCTTT GCACGAGCTG CATCGGCTGA TGCGAACCAT CAGCAACGCC
ATTGGCTCTC TTCACGATCC TCAAGAGCTA TTCCATACCA TTATAACTCA GCTCCGCCTC
TTTTTTGCTT TCGATTCTGC TGCCATTATT ACCCTCGACA ACAATCAGCG CCATTGTTCT
CTCTTTTTTG AAATGCTGCG TTTTCAATTG CCTGAGGGTT TTGTGCGTTA TCAACGCCCT
GTGGCAGGCT CGTGGATTGA GCCGCATGTG GAGGCGCAAA AGGTTGCCGT TATCCGTTTG
CGCGATTCAC TTGAGCATTT CCCCGTTGAT GTTGAGTTAC GCCAACATTT GCTTGAGCTT
GGATTAAAGC AAGCAGTGCT TTCGCCTTTG CGGGCAGGTG GCAAGGTGAT TGGTTTTTTG
ACCTTTGTTT TTCAAGAAGA GCAGGAGTGG CTTGATGAGG AGTGTGAGCT CTTAGCTACC
GTTTCCACGC CTATTGCCGT TGCCGTGAGC AATGCGTTAG CTTACGAGGA ACTCCGTAAG
CGGGAGGCGC AAACCGCTAT GCAGCTTGCC GTTAACAATG CGTTGCTTAC CATTCGTGAG
CGCAATAGCA TGATGCTTGC GGTGTGTGAG CAGGTGCAAA AGTTGCTGCC TTGTACCTTT
CTTGGCATTA GGGTGATGGA TAAGGAGGGC AACTATCGCT TGTACGATAA CTTTCGTCTT
CAGCCTGATG GAGCCTTTGC GCCTGTAACT GCGGCACTTG ATATGGAGAA TTACGACTCC
ATTGCCCGTG CAAGTTTTGA TTTAGCCATC ATTGGTGGTT ACTACGGCGG CAACAGCTTT
CTTGAGCTTT GCGCTCGCTT TCCAATTTTA GAGCATGTTC GCCAAAAATA TGGCATTTGC
TCATTCTTGA GCCTTCCGTT ATGGGAGCTG CCAGCCAGCC GTGCTGGGCT TATTATTTCT
ACCACTATGC GCCCTTTTGA TGGGCACGAT CAAGCAACGG CGAATCTTAT TGTGCCGCAA
CTTTCGCTTG CCTTGCAAAA CTATCTTGCC TTTGAAGAAA TTAACGAGTT GCGCCATAAG
CTTGAGGGTG AACGAAGCTG CCTTATTGAA GAGATTACGG CAACGCATCA TGTTGGGGAA
ATTATAGGGA GCAGCTCTGC GTTAACTGCC GTGCTCTATC GCCTCCAGCA AGTTGCGCCC
ACCGATGCCA CCGTACTTAT TCAAGGCGAA ACGGGCACAG GTAAAGAGCT TTTTGCGCGT
GCCTTGCACA ACCTTTCAGC CCGAAGCAAA CGCGCTCTTA TTAAGGTGAA CTGTGCCACC
CTTCCCGCCT CGCTTATTGA GTCGGAACTT TTTGGACATG AAAAAGGGAG CTTTACGGGA
GCCACAGAAC GGCGTATTGG TAAATTTGAG TTAGCCGAAG GGGGCACTAT TTTTTTGGAT
GAAATTGGGG AGCTGCCACT TGAGTTGCAG GCAAAGCTGC TACGCGTGTT GCAAGAGCGT
GAATTTGAAC GGCTTGGTGG ACGCCACGTT ATTCGTGCAA ATGTGCGCGT TATTGCTGCT
ACCAATCGCA ATGTAGAGCA AGAGGTTGCT TCAGGGCGAT TCCGCGAAGA CCTCTATTTT
CGCCTTAACG TGGTGCCACT TCACGTTCCA CCGCTTCGTG AACGGCGCGA TGATATTGCT
CTGCTTGCCA ACCACTTTGC GAACCGCTAC GCCCGTGAGT TTAGCAAGCC AAACCGTCCC
ATCCGCCAAA ACGATATGCA ACGCTTGCTC GGGCGCGAAT GGAAAGGCAA CATTCGTGAA
CTTGCCCACA TGGTTGAACA AGCCGTTATT CTCTCGGAAG GCTCGACGCT TGATTTCGCA
ACCATTCTTG CTCCCCAACA AACACTCAAT GCTCCTACAA ACCGTGCTAT CTCCAGCCTC
CGCACTATGC GCGCCTTTGA GGAGGAAATG ATTGCGATGG AAAAGCAGCT TATTCTTGAT
ACTCTTGAAG CAACGGGTGG ACGGGTAAGT GGCTCTGGAG GTGCTGCCGA ACGGCTTGCT
ATGCACCCCA AAACGCTTTA TACCCGTATT GCAACGTTAG GATTAAGCAA GCGGTATGGA
TAG
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| Protein sequence | MPITHSLHEL HRLMRTISNA IGSLHDPQEL FHTIITQLRL FFAFDSAAII TLDNNQRHCS
LFFEMLRFQL PEGFVRYQRP VAGSWIEPHV EAQKVAVIRL RDSLEHFPVD VELRQHLLEL
GLKQAVLSPL RAGGKVIGFL TFVFQEEQEW LDEECELLAT VSTPIAVAVS NALAYEELRK
REAQTAMQLA VNNALLTIRE RNSMMLAVCE QVQKLLPCTF LGIRVMDKEG NYRLYDNFRL
QPDGAFAPVT AALDMENYDS IARASFDLAI IGGYYGGNSF LELCARFPIL EHVRQKYGIC
SFLSLPLWEL PASRAGLIIS TTMRPFDGHD QATANLIVPQ LSLALQNYLA FEEINELRHK
LEGERSCLIE EITATHHVGE IIGSSSALTA VLYRLQQVAP TDATVLIQGE TGTGKELFAR
ALHNLSARSK RALIKVNCAT LPASLIESEL FGHEKGSFTG ATERRIGKFE LAEGGTIFLD
EIGELPLELQ AKLLRVLQER EFERLGGRHV IRANVRVIAA TNRNVEQEVA SGRFREDLYF
RLNVVPLHVP PLRERRDDIA LLANHFANRY AREFSKPNRP IRQNDMQRLL GREWKGNIRE
LAHMVEQAVI LSEGSTLDFA TILAPQQTLN APTNRAISSL RTMRAFEEEM IAMEKQLILD
TLEATGGRVS GSGGAAERLA MHPKTLYTRI ATLGLSKRYG
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