| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1999 |
|---|
| Symbol | |
|---|
| ID | 3747109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 2533520 |
|---|
| End bp | 2534854 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637774536 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_380290 |
|---|
| Protein GI | 78189952 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.92579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCACA AACACTTAAC GGCGCTGCTC ATGCTTGGGG CGTTGCTTTT GACGGGAGGC
AACGCTTGGG CGGCAGATGA GGTCGTTACG GATAGTGGCA CAACCTCGTG GATGCTTACC
TCTACGGCGC TTGTGCTGCT TATGATTCCC GGACTTGCAA TGTTTTACGG CGGTTTGGTG
CGCACCAAAA ATGTGCTTGG CACCATGATG CATAGCTTTG GTGCCATGGT CATTATTGGC
GTGCTATGGC CTATGGTTGG CTATGGATTA AGCTTTGGAC CTGGCATTCT TGGTGGTTTA
GCGGGATGGG ACGATAAGTT CTTTTTCTTG CAAGGTATTG ATGATTCTAT TATGAGTACA
CACATTCCCG AATATGTGTT TGCTATGTTC CAAGGCAAAT TTGCCATTAT TACACCAGCG
CTTATTGCAG GTGCTTTTGC TGAAAGGGTT AATTTTAAAG GCTATGCAGT GTTCATAGCG
CTATGGTGCA TTTTGGTTTA TAGCCCAATT TGCCACTGGG TGTGGGCTTC TGACGGCTTC
CTTTTTAACC TTGGTCCATC GGGTGCTATT GATTTTGCGG GTGGTACGGT TGTACACATT
TCATCGGGCA TTACGGCGTT AGTTGCCGCC TTGTACCTTG GCAAACGTCG TGGTTATCCC
AGCACGGCAA TGTCGCCCAA CAACTTGGTG ATGACGCTTA TTGGCGCTGG TTTGCTTTGG
GTTGGATGGT TTGGTTTTAA CGCTGGTAGT GCTATTGCCA GCGATCTTGT AACGGCTCGC
GCTTTAACGG TTACACAAGT TGCTGCCGCT TCGGGCGCTT TTGCTTGGAT GATTATTGAA
ATGTTCCATC ATGGAAAAGC CACCAGCCTT GGTGTTGCTT CGGGTATTCT TGCTGGGCTT
GTGGCAATTA CTCCAGCCGC CGGTGTGGTT CAGCCAATTG GTGCTTTTGC TCTTGGTGCT
CTTGCGGCTG CCATTTGCTA CAGTGCAATT CTTTTAAAAA GCAAGCTTGG CTACGACGAC
AGCCTTGATG CTTTTGGCGT GCATGGTGTT GGTGGTATTG TTGGCGCTTT AGCTCTTGTT
TTCTTTATTC GCCCAAGCTG GTTAGCTGAT GCGGCTGCTA AAACCGCCAA CAACAGTTGG
ACAATGTGGG ATCAACTTGG CGTGCAAGCT ACAGCCGTTG GCGTTACCAT TGCGTATGCA
GCCGTTATTT CCTTTGTACT GCTCTTTATT GTAGAAAAAA CTGTAGGCTT GCGCATTTCA
GAGGATGATG AAATGTCGGG GCTTGATCAC AGTATGCACG GTGAACAAGG ATATGGGCTT
ATCAACCTTA ACTAA
|
|---|
| Protein sequence | MKHKHLTALL MLGALLLTGG NAWAADEVVT DSGTTSWMLT STALVLLMIP GLAMFYGGLV
RTKNVLGTMM HSFGAMVIIG VLWPMVGYGL SFGPGILGGL AGWDDKFFFL QGIDDSIMST
HIPEYVFAMF QGKFAIITPA LIAGAFAERV NFKGYAVFIA LWCILVYSPI CHWVWASDGF
LFNLGPSGAI DFAGGTVVHI SSGITALVAA LYLGKRRGYP STAMSPNNLV MTLIGAGLLW
VGWFGFNAGS AIASDLVTAR ALTVTQVAAA SGAFAWMIIE MFHHGKATSL GVASGILAGL
VAITPAAGVV QPIGAFALGA LAAAICYSAI LLKSKLGYDD SLDAFGVHGV GGIVGALALV
FFIRPSWLAD AAAKTANNSW TMWDQLGVQA TAVGVTIAYA AVISFVLLFI VEKTVGLRIS
EDDEMSGLDH SMHGEQGYGL INLN
|
|---|
| |