Gene Cag_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1997 
Symbol 
ID3747107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp2532303 
End bp2533049 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content48% 
IMG OID637774534 
ProductTPR repeat-containing protein 
Protein accessionYP_380288 
Protein GI78189950 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGGGTA CCTTTCTGTT TTGTGCTGTT ATGAATTTTT CACTTTCTCA CCTTGCTCGC 
ACCATAGCAT TGTTGCTGTT AACCGCTTCG CCTGCTTTCG CAGAATCGGC AGATGAGCTG
TTTAACCGTG GCTTTGCGTT GCATATGCAG GGCAAGTTGC AAGAGGCTGT AAGCTGTTAC
TCCGATGCCA TTGATGAGGT ACCAACCTTT GCCATGGCAT TTCAAATGCG AGCACTTGCC
TATCAGCAAC TTAAAAAATT TCCTAAAGCA GTAAATGATT ATTCAAGCGC TATTGAACAA
GGTGATGCTT CGTTTAAAGT GGTGGGTTAC TACAATCGTG GGGTTGTGAA AAATATAATG
GGCGATTTTG TGGGCGCTGT GGATGATTTT TCGCAAGCTA TTGTACTCAA CAAAAAAATG
GCGACGGCGT TTTTTCATCG AGGAATTGCA CGCCATCAGC TTGGTGATAA CGATGGACGT
TTTGAGGATT TTCGTCAAGC TGCGTTACTT GGCGATCGTA CTGCCGAGCA GTGGCTCAAC
ACCTACCATC CCAATTGGAA GCCTGTGCCC CCCAGTCCAC CTTCCATTCC GCCCTCCATA
CCGTCATCTT TACCAGCCAC GGCACCACCA ATTCAGCCGT CATCTCCCCC CACTGCCCCA
ACTGATGCAC CCAAACCAGC ATCGGTACAA CCTGCACCAA GCGAACCGAA CGATTCCACA
CGCACGTCAG CAACAACACC CGCATAA
 
Protein sequence
MWGTFLFCAV MNFSLSHLAR TIALLLLTAS PAFAESADEL FNRGFALHMQ GKLQEAVSCY 
SDAIDEVPTF AMAFQMRALA YQQLKKFPKA VNDYSSAIEQ GDASFKVVGY YNRGVVKNIM
GDFVGAVDDF SQAIVLNKKM ATAFFHRGIA RHQLGDNDGR FEDFRQAALL GDRTAEQWLN
TYHPNWKPVP PSPPSIPPSI PSSLPATAPP IQPSSPPTAP TDAPKPASVQ PAPSEPNDST
RTSATTPA