Gene Cag_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1993 
SymbolrnhB 
ID3747103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand- 
Start bp2530005 
End bp2530625 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content48% 
IMG OID637774530 
Productribonuclease HII 
Protein accessionYP_380284 
Protein GI78189946 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACACTC ATTACGAAGA GCCGCTGTGG CAACACTACG AATTCATTTG CGGTATTGAT 
GAAGTTGGTC GAGGTCCACT TGCAGGACCA GTTGTTGCGG CTGCCGTTGT TTTCCCTCGC 
TGGTTTCAGC CAACAGAGGC ATTACTGACG TTGCTGAATG ACTCCAAAAA GCTCTCGGCA 
AAAGAGCGCG AAAGCTTAGT GCCTGCCATT AAAGCTCAAG CACTCCATTG GGCACTTGCC 
GAAGTGCAGC ACAACGTGAT TGATGAAGTG AACATTTTGC AAGCCACCAT GCTTGCTATG 
AATAACGCCG TTAAAGCACT GCCCATTATA CCATCGCTGC TACTTGTTGA TGGCAATCGC 
TTTACAACCG ATCTTGCAAT TCCTTACAAA ACCATTGTTA AGGGCGATAG CCATGTTTTT 
TCTATTGCCG CCGCTTCCGT GTTAGCAAAA GTCCACCGCG ATGCCTTGAT GTGCGTTTAT 
GCAACTCACT ACCCACATTA TGGTTTTGAA CGCCATGCAG GCTATCCAAC AAGCGCACAC 
ATTGAAGCCA TTCGCCAGCA TGGACGCTGC CCAATACATC GTCAAAGCTT TAAACTGCGC 
CAACTTGGCG AAAAAGTATG A
 
Protein sequence
MHTHYEEPLW QHYEFICGID EVGRGPLAGP VVAAAVVFPR WFQPTEALLT LLNDSKKLSA 
KERESLVPAI KAQALHWALA EVQHNVIDEV NILQATMLAM NNAVKALPII PSLLLVDGNR 
FTTDLAIPYK TIVKGDSHVF SIAAASVLAK VHRDALMCVY ATHYPHYGFE RHAGYPTSAH 
IEAIRQHGRC PIHRQSFKLR QLGEKV