| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1974 |
|---|
| Symbol | |
|---|
| ID | 3747352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 2506774 |
|---|
| End bp | 2507607 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637774510 |
|---|
| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
|---|
| Protein accession | YP_380265 |
|---|
| Protein GI | 78189927 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase
[TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAAA AGTTCTCAAT AGGCTCCATT ACTGTGCCCG ATTGCGAGTT ACCACTGCTT
ATTGCTGGTC CTTGCGTTAT TGAAAGCCGA GCTATGGCAT TTGAAATTGC TGACGAGCTG
CAACGCATTA GCCAAGCCGA AGGGGTACGC TTTATTTTTA AAGGCTCTTA CCGCAAAGCA
AACCGCACCT CTGCCGCATC GTTTACAGGC ATTGGCGATG AAGATGCCCT TACCATTTTA
GCCGATATTC GCCAAAAATA TGGAATGCCC GTGCTTACCG ATGTGCACGA AAGTGCTGAA
GTGGCACTTG CTTCCCGCTA TGTTGATGTG CTTCAAATTC CAGCTTTTCT CTGCCGCCAA
ACCGAGTTGC TTGTTGCTGC GGGCGAAAGT GGCTTAGCGG TAAACATTAA AAAAGGGCAA
TTTATGGCGC CCGACGATAT GCGCCTTGCC GCCGCAAAAG TTGCACGAAC GGGCAATAAC
CGCATTTTGC TTACCGAACG TGGCTCCAGC TTTGGCTACC ATAATTTAGT GGTGGACTTT
CGAGGTATTG CAAAAATGGC GGAATCGGGT TACCCCGTAC TCTACGATGC AACGCATAGC
CTTCAGCTTC CGGGCGCAGG GCAGGGAATG TCGGGCGGCG AGCGCGAATA TATGCTCCCA
CTGGCGCGTG CTGCTGTGGC AACAGGCGTT GATGGACTTT TTTGCGAAAT TCACCCCAAC
CCCGAAAAAG CCTTATCGGA TGCGGCAACG CAAATTCCTC TGGCTGAATT TGGCGTAATA
ATTCACCAAC TGCTTCACCT TTATCGGTGT GTGCAGCCTC TTCTTTCACA CTAA
|
|---|
| Protein sequence | MQQKFSIGSI TVPDCELPLL IAGPCVIESR AMAFEIADEL QRISQAEGVR FIFKGSYRKA
NRTSAASFTG IGDEDALTIL ADIRQKYGMP VLTDVHESAE VALASRYVDV LQIPAFLCRQ
TELLVAAGES GLAVNIKKGQ FMAPDDMRLA AAKVARTGNN RILLTERGSS FGYHNLVVDF
RGIAKMAESG YPVLYDATHS LQLPGAGQGM SGGEREYMLP LARAAVATGV DGLFCEIHPN
PEKALSDAAT QIPLAEFGVI IHQLLHLYRC VQPLLSH
|
|---|
| |