Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1961 |
Symbol | |
ID | 3747823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 2489384 |
End bp | 2489893 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637774497 |
Product | hypothetical protein |
Protein accession | YP_380252 |
Protein GI | 78189914 |
COG category | [S] Function unknown |
COG ID | [COG2210] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000557384 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGATA CGAAAAAGCT TGCAATTATT GCATCGCAGG GCACTCTTGA TTGGGCGTAT CCTCCCTTTA TTCTTGCTTC TACGGCTGCT GCTATGGATA TGGAAGCTGT TATTTTCTTC ACTTTTTATG GCTTACCTCT CCTTAAAAAA GAGATTGATT TAAAGGTTTC GCCACACACC AATCCTGCAA TGCCAATGAA AATGCCGTTT GGCAGCAAGG AATTTCAAGG TGTTAATTGG TCTATTCCCA ACCTTATTTC GGGCAACGTA CCCGGTTTCG ATAACATGGC AACCATGCTG ATGAAAGAGA CCTTTAAAAA GAAAGGGGTG GCAACTATCG AGCAACTTCG TAGCATGTGT CAAGAGTTTG GCGTGCGCTT TATTGCCTGC CAAATGACTA TGGAGGTGTT TGGTTTTGAA AAAGATCAAT TTATTGATGG TGTTGAATAT GGTGGTGCAG CAACCTTTCT TGAGTATGCT GCCGACGCCA ATATTTCTCT CTTTATTTGA
|
Protein sequence | MADTKKLAII ASQGTLDWAY PPFILASTAA AMDMEAVIFF TFYGLPLLKK EIDLKVSPHT NPAMPMKMPF GSKEFQGVNW SIPNLISGNV PGFDNMATML MKETFKKKGV ATIEQLRSMC QEFGVRFIAC QMTMEVFGFE KDQFIDGVEY GGAATFLEYA ADANISLFI
|
| |