| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1931 |
|---|
| Symbol | |
|---|
| ID | 3747306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 2463146 |
|---|
| End bp | 2463511 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637774466 |
|---|
| Product | Hit family protein |
|---|
| Protein accession | YP_380222 |
|---|
| Protein GI | 78189884 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000000107765 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACA ATCAAGAACA AGATTGCCTT TTCTGCCGCA TTGTGCGGGG TGAAATTCCT
GCAACCATTG TGTATCGTAA CGAACACGTT GTAGCGTTTA AGGATATTAG CCCAACGGCA
CCACACCACG TCCTTATTAT TCCCGTGCAG CACGTTGCTT CGCTTAACGC CCTTTCGCCC
GAGCATGAAG CGGTGGCAGG GCAGCTTTTG CTTGCGGCAG CACCTGTAGC CGAAGCGCTT
GGCATTAAAG AGTCGGGCTA TCGCTTTGTT ATTAACACAG GCGCTGATGC CATGCAAACC
GTATTCCACA TTCATGCGCA TCTCATTGGT GGGCAGGCGA TGGGTTGGCC TCCGTTTCCC
GTATAA
|
|---|
| Protein sequence | MSHNQEQDCL FCRIVRGEIP ATIVYRNEHV VAFKDISPTA PHHVLIIPVQ HVASLNALSP
EHEAVAGQLL LAAAPVAEAL GIKESGYRFV INTGADAMQT VFHIHAHLIG GQAMGWPPFP
V
|
|---|
| |