Gene Cag_1923 details

Gene Information

• Locus tag: Cag_1923
• ID: 3747298
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: +
• Start bp: 2455707
• End bp: 2456168
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637774458
• Product: twin-arginine translocation pathway signal
• Protein accession: YP_380214
• Protein GI: 78189876
• COG category: [S] Function unknown
• COG ID: [COG5501] Predicted secreted protein
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.921102
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAATGA CCCGTCGCCA ATTTTTTTCG ACCATTGCGG GCGCTGCCGC TTCTGCCGCA 
TTGGTTGCCG CTTTACCAGA GCGCCTGCTT GCGGCTTGGA GCGATAAGGC TTTTACAGCA 
TCTACGCTTG CCAATGCTAT TGCAGGCAAA TATGGCAATT TACCCATTGA GGACTCAACT 
GCTATTCAAG TAAAAGCTCC TGAAATTGCT GAAAATGGTG CTGTTGTGCC TATAACTGTT 
GCAACCAATA TTGCGGGAGC AACCAACATT TCAATTTTTA CCGAAGCAAA CTTTGCACCA 
ATGGTGGCAT CGTTTGACCT CTTACCGCGC TCTCTGCCAG AGGTTTCGTT GCGGATGCGT 
ATGGCAAAAA CTGCCACTGT GGTTGTGTTG GTACAAGCTG GCAATAAACT GTACCGCGCC 
ACGCGTGAGG TAAAAGTAAC CATTGGCGGC TGCGGTGGAT AG 

 

Protein sequence

MGMTRRQFFS TIAGAAASAA LVAALPERLL AAWSDKAFTA STLANAIAGK YGNLPIEDST 
AIQVKAPEIA ENGAVVPITV ATNIAGATNI SIFTEANFAP MVASFDLLPR SLPEVSLRMR 
MAKTATVVVL VQAGNKLYRA TREVKVTIGG CGG