| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1921 |
|---|
| Symbol | |
|---|
| ID | 3747296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 2453687 |
|---|
| End bp | 2455000 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637774456 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_380212 |
|---|
| Protein GI | 78189874 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000266613 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTTC AGTGCGTTAT GACAAATCAT CAGCTTTCAC GGCGCGATTT TGCAAAGTTG
TTACTGTCGA GCACGGCAGG CGCTTTGCTT GGGGTTGGTG TGCCATCGTC GCGTACGTAT
GCGGCAACCA ATCGTGTAGT TATTATTGGT GGTGGGTTTG GTGGAGCTAC GGCAGCAAAG
TATCTCCGCA AGCTTGATCC GTCGGTTGCT ATTACGTTGG TTGAGCCAAA ATGCCAATTT
TATACCTGCC CTATTAGCAA TTGGGTGATT GCTGGTTTAA AGCCAATGCA CGCTATTGCG
CAAAATTATA ATGCGTTAAG GGTGCGTTAT GGTGTAAATG TGGTACACGC TACGGCGGTG
GCTATTGATG CCTTAAAAAA CAGCGTTACC CTGCATAGTG GCAAAAAGCT CTTTTATGAT
CGTTTAATTG TGTCGCCCGG TATTGATTTC CGTTGGAATG CAATTCCTGG TTATAGCCAA
AAGGTGGCTG AAAGTGTTAT GCCGCATGGT TTTCAAGCGG GTGAGCAAAC GTTGCTGTTG
CGCAAGCAAT TGCTGGCAAT GCCGAATGGT GGCACGGTAA TTATGTGCCC TCCCAACAAT
CCGCACCGTT GCCCTGCTGC ACCTTATGAG CGTGCAAGTT TAATAGCACA TTATTTAAAG
CAGCACAAGC CAAAGTCGAA GGTGCTCATT CTTGATTGCA AGGAGAAGTT TTCCAAACAA
GAGCTTTTTT TGCAGGGTTG GGAGCGTTTG TATTCGGGAA TGATTGAATG GCGTGCGGCA
ACGGCTGGCG GTAAAGTGGA GGCGGTGAAT AGTGCGGCTA TGACGGTTAC CACCGAGTTT
GGTGATGAAA AGGGTGACCT TATTAATATT ATGCCACCGC AACAAGCGGG TCGCATTGCT
TTTGAGGCTG GTTTAACCGA TGCCGCTGGT TGGTGCCCTG TGCATCCCAT TACCTTTGAA
TCAACGCTGC ATCCCGGCAT TCACATTATT GGCGATGCTT GCCACGCGGG TGATATGCCA
AAATCAGCAT TTGCCTCAAG TAGCCAAGGG AAGGTGGCAA GTTCGGCTAT TGCTGCATTA
CTGCAAGGCA GAGTGCCTGT TGCGCCATCA TTAGTAAGCA CCTGTTACAG CTTACTTAAG
CCCGATTACG CTATTTCGGT AGCTAATGTT TTTCGTTTAA CGATTGACGG TATTGTTGAT
GTAAAAGGTT CGGGTGGCGT TACCCCGCTT GATGCGTCGG TGGAACATTT GCAACACGAA
GCCGATTTTG CATGGGGATG GTACGAAAAC ATTACACGCG ATACGTGGGG CTAA
|
|---|
| Protein sequence | MFFQCVMTNH QLSRRDFAKL LLSSTAGALL GVGVPSSRTY AATNRVVIIG GGFGGATAAK
YLRKLDPSVA ITLVEPKCQF YTCPISNWVI AGLKPMHAIA QNYNALRVRY GVNVVHATAV
AIDALKNSVT LHSGKKLFYD RLIVSPGIDF RWNAIPGYSQ KVAESVMPHG FQAGEQTLLL
RKQLLAMPNG GTVIMCPPNN PHRCPAAPYE RASLIAHYLK QHKPKSKVLI LDCKEKFSKQ
ELFLQGWERL YSGMIEWRAA TAGGKVEAVN SAAMTVTTEF GDEKGDLINI MPPQQAGRIA
FEAGLTDAAG WCPVHPITFE STLHPGIHII GDACHAGDMP KSAFASSSQG KVASSAIAAL
LQGRVPVAPS LVSTCYSLLK PDYAISVANV FRLTIDGIVD VKGSGGVTPL DASVEHLQHE
ADFAWGWYEN ITRDTWG
|
|---|
| |