| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1912 |
|---|
| Symbol | |
|---|
| ID | 3747657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 2431671 |
|---|
| End bp | 2432534 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637774449 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_380205 |
|---|
| Protein GI | 78189867 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC ACATTCTCCC TTTTCTTGCC CTACCCTTCG TGTTGCTTAA TGCTTGTGCA
TCGAAGCAAG AGCTTAATGT GGTGCAATAC GATGTAACAC GCTTAAAAAG TGAAGCCTCA
AATCTTAAAA ACGAAGCACA AGCCATTAAG TCGCAAACAG CCGTTTCGTA TGCCGATATG
CAGCAAGTGC GCAATGATAT CGCTCGTCTT AATGGCTCAC TTGAGGAGGT ATCGCACCGC
ATTACAGAGC AAACCAATAA AAACAACAAC GTTTTTAAAC GACTTGGCAC CGAAGATTCA
TTGTTAGTGC ATCAACTCAG TGGACTTGAA ACTAAAGCCG CAGTGCTCGA AAAAAAACTT
GCCACACTTG ATAGTCGTTT ACTTGCTCTT GAGGGTATTG TTGGTACGGG AACGGAAGCG
CTTCGTAAAG ATTCTGTAGC TACAACCTCA ATAAAGCCAG CGGTCGCATC TACATTAGCG
GTAGAGCCCA CACCCGCTAC CGTCAACGAT GCCTCCATGT TTCAAGAAGG TGTAACGCTT
TTTGGTAAGA AAAATTATGG AGCCGCTCGC CAAACCTTTA TGGCTCTCAT TAAGCGCTTT
CCCACCTCTC TCTTAGTAGG AGATGCTCAA TTTTATATAG CCGATAGTTT TTTTAGCGAG
AAACGCTATG AACAAGCAAT TGTGGAGTAT CAAGAGGTGA TTGCGAAATA TCCCAAAAAC
AGTAAACGCC CAGCCGCATT GTATCGTCAG GCGCGTTCAT TTGAACTCAT TGGTGATGTT
GCCAATGCGA AAACTCGTTA TAAAGATGTG GTGAATGTTT ATCCCACCTC TCCCGAAGCG
GCACTTGCTA AGAAGAAGTT GTAG
|
|---|
| Protein sequence | MKKHILPFLA LPFVLLNACA SKQELNVVQY DVTRLKSEAS NLKNEAQAIK SQTAVSYADM
QQVRNDIARL NGSLEEVSHR ITEQTNKNNN VFKRLGTEDS LLVHQLSGLE TKAAVLEKKL
ATLDSRLLAL EGIVGTGTEA LRKDSVATTS IKPAVASTLA VEPTPATVND ASMFQEGVTL
FGKKNYGAAR QTFMALIKRF PTSLLVGDAQ FYIADSFFSE KRYEQAIVEY QEVIAKYPKN
SKRPAALYRQ ARSFELIGDV ANAKTRYKDV VNVYPTSPEA ALAKKKL
|
|---|
| |