| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1908 |
|---|
| Symbol | |
|---|
| ID | 3747653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 2428200 |
|---|
| End bp | 2428625 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637774445 |
|---|
| Product | ExbD/TolR family protein |
|---|
| Protein accession | YP_380201 |
|---|
| Protein GI | 78189863 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | [TIGR02801] TolR protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGACAA ATGGAGGAAA ATCGCGCTTG ATGGCGGACA TTAACGTTAC CCCTTTTGTG
GATGTGATGT TAGTGTTGCT CATTATTTTT ATGGTAACAG CTCCTATGAT GACGCATGGG
GTGAAGGTTG ATACTCCTCA AACAACGCAC GAAAAAATTG ATGTTGACCC TCGCAGCGTT
ATGGTGTCGC TTGATGGTTC GGGTAACCTT TTTGTAAACG ATGCCAAAAT TCCACGTTCC
GAAATTCGAG AGCGCCTGCC GCAGCTTTTA AATGTTAAAG AGGTGCATGA AGTGTATTTA
AAAGCCGACA AATCGCTCCC TTACGGTGTG GTGATGGAGG TTATGGCAAG CATTCGTGAT
GCAGGCATTG AAAAAATTGG CATGGTAACG GAACCAAGCG TGCCAGCACC TCAAGCGGGA
GAGTAG
|
|---|
| Protein sequence | MMTNGGKSRL MADINVTPFV DVMLVLLIIF MVTAPMMTHG VKVDTPQTTH EKIDVDPRSV
MVSLDGSGNL FVNDAKIPRS EIRERLPQLL NVKEVHEVYL KADKSLPYGV VMEVMASIRD
AGIEKIGMVT EPSVPAPQAG E
|
|---|
| |