Gene Cag_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1907 
Symbol 
ID3747652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp2427525 
End bp2428187 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content50% 
IMG OID637774444 
ProductExbB/TolQ family protein 
Protein accessionYP_380200 
Protein GI78189862 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02796] TolQ protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTTG ATGCTCCTTC GGGAATTTTT GCGTTAGTTG CTGACGCTGG AGCTGTTGTG 
CTGGTGGTGC TTTTTACCTT GCTTGCATTT TCAGTGGTGT CGTGGGCAAT TATTGCTTAT
AAAGCTATTG GTTTGCGTGC AGCACGTTAT GAGTCCAAGC TCTTTATGGA TGCTTTTTTT
GATGTTGCGC CCGAACGCCT TTTTGCTGAA AGTGAGCGTT TGAGCGGCGC TCCACTTGCG
CGTGTTTATC GGGCGGGTTA CATAGCCTTT CGTGCGCTTG ATGGCAAAAA CGTTACGTTT
AAGCAAGCGC AAGCGGTGGT GGCGCGTGCT ATTAAGCGTG CGACTAATGC CGAAACCAAG
CAGCTTGCAA GCCTTGTCCC TTTTCTTGCA ACGGTAGGCA ATACCGCTCC CTTTATTGGT
TTATTTGGCA CCGTCTGGGG TATTATGACC TCCTTTCAAG CAATTGGTGT AACGCGCTCA
GCCTCGCTTT CAGCCGTAGC GCCCGGTATT TCTGAAGCGT TAGTTGCAAC AGCCGTAGGG
CTTGCAGCCG CAATTCCAGC GGTAATGGGC TACAACTATC TTACCCAACA AGTTGGATTG
CTTGAGCGCG ATATTGAGGA ATTTGCACCT GAGTTTGTGA CGGCACTTAT TAACGAGCCG
TAA
 
Protein sequence
MSLDAPSGIF ALVADAGAVV LVVLFTLLAF SVVSWAIIAY KAIGLRAARY ESKLFMDAFF 
DVAPERLFAE SERLSGAPLA RVYRAGYIAF RALDGKNVTF KQAQAVVARA IKRATNAETK
QLASLVPFLA TVGNTAPFIG LFGTVWGIMT SFQAIGVTRS ASLSAVAPGI SEALVATAVG
LAAAIPAVMG YNYLTQQVGL LERDIEEFAP EFVTALINEP