Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1907 |
Symbol | |
ID | 3747652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 2427525 |
End bp | 2428187 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637774444 |
Product | ExbB/TolQ family protein |
Protein accession | YP_380200 |
Protein GI | 78189862 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCTTG ATGCTCCTTC GGGAATTTTT GCGTTAGTTG CTGACGCTGG AGCTGTTGTG CTGGTGGTGC TTTTTACCTT GCTTGCATTT TCAGTGGTGT CGTGGGCAAT TATTGCTTAT AAAGCTATTG GTTTGCGTGC AGCACGTTAT GAGTCCAAGC TCTTTATGGA TGCTTTTTTT GATGTTGCGC CCGAACGCCT TTTTGCTGAA AGTGAGCGTT TGAGCGGCGC TCCACTTGCG CGTGTTTATC GGGCGGGTTA CATAGCCTTT CGTGCGCTTG ATGGCAAAAA CGTTACGTTT AAGCAAGCGC AAGCGGTGGT GGCGCGTGCT ATTAAGCGTG CGACTAATGC CGAAACCAAG CAGCTTGCAA GCCTTGTCCC TTTTCTTGCA ACGGTAGGCA ATACCGCTCC CTTTATTGGT TTATTTGGCA CCGTCTGGGG TATTATGACC TCCTTTCAAG CAATTGGTGT AACGCGCTCA GCCTCGCTTT CAGCCGTAGC GCCCGGTATT TCTGAAGCGT TAGTTGCAAC AGCCGTAGGG CTTGCAGCCG CAATTCCAGC GGTAATGGGC TACAACTATC TTACCCAACA AGTTGGATTG CTTGAGCGCG ATATTGAGGA ATTTGCACCT GAGTTTGTGA CGGCACTTAT TAACGAGCCG TAA
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Protein sequence | MSLDAPSGIF ALVADAGAVV LVVLFTLLAF SVVSWAIIAY KAIGLRAARY ESKLFMDAFF DVAPERLFAE SERLSGAPLA RVYRAGYIAF RALDGKNVTF KQAQAVVARA IKRATNAETK QLASLVPFLA TVGNTAPFIG LFGTVWGIMT SFQAIGVTRS ASLSAVAPGI SEALVATAVG LAAAIPAVMG YNYLTQQVGL LERDIEEFAP EFVTALINEP
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