Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1899 |
Symbol | |
ID | 3747644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 2418042 |
End bp | 2418608 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637774436 |
Product | 3-isopropylmalate dehydratase, small subunit |
Protein accession | YP_380192 |
Protein GI | 78189854 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit [TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACAA TCATTCAGGG AAAAGCCTAC GTGTTAGGCA AGAATATTGA TACCGATCAA ATTATTCCCG CTGAACATTT GGTTTATAGC CTTTCCGATC CAAAAGAGGT GGTGCTGTAT GGTAAATACG CCCTTTCAGG CGTTCCACCC GAGCAAGGTG GCTTACCACA AGGCAACATT CCTTTTGTGC GCGAAGGCGA AGTAACATCA GACTACACGA TTATTGTTGC GGGAGCTAAC TTTGGTTGCG GCTCCTCGCG TGAGCACGCC CCATTTGCCT TGCAAGTTGC AGGCGCAAAA GCCATTGTGG CTGAGTCATA CGCTCGCATT TTTTACCGCA ACTGCGTTGA TGGTGGTTTT GTGATTCCAT GCGAAAGCAC AGAGTCGCTC GCACAAGCAG TAAGCACAGG CGATGAGTTG AAAATTGACG TTATGGCAAA CACACTCGAA AACCTTACAA CCAAGAAAAG CTACAAGCTC AATCCTCTTG GAAGCGTTTT TAGCATTGTG GAAGCTGGCG GCATTTTTGC TTACGCCAAA AAAGAAAATT TAATGGCGCA AAGCTAA
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Protein sequence | METIIQGKAY VLGKNIDTDQ IIPAEHLVYS LSDPKEVVLY GKYALSGVPP EQGGLPQGNI PFVREGEVTS DYTIIVAGAN FGCGSSREHA PFALQVAGAK AIVAESYARI FYRNCVDGGF VIPCESTESL AQAVSTGDEL KIDVMANTLE NLTTKKSYKL NPLGSVFSIV EAGGIFAYAK KENLMAQS
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