| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1898 |
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| Symbol | |
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| ID | 3747643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 2416439 |
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| End bp | 2418037 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637774435 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_380191 |
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| Protein GI | 78189853 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTAT GCACAACCCC TATTGAGTTG TACGATACCA CCCTGCGTGA TGGCACGCAG
GGTGAGCATA TCAACCTTTC TGTTCAAGAT AAACTGCTCA TAGCCCAAAA GCTTGATGAG
TTCGGCATGG ACTTTATTGA AGGTGGCTGG CCCAGCAGTA ATCCCAAAGA TGAAGAGTTC
TTTCTGAAAG CGCGCCACCT TACCTTTAAA CATGCGCGTC TCACCTCTTT TGGCTCAACC
GCTCGCTCGG TTAAAGCGGT AGAAAGCGAT CCCAATTTGC TTGGCTTGCT TCGCTCCGAA
ACGCCCATTA TTACCATTTT TGGTAAAACA TGGCAGGCAC ACTCCCTTAA AAGTCTTGGT
ATTTCCGATG AAGAAAATGC TGAATTGATT TATCGTTCAG TAGCTTTTTT GAAGGAAAGT
GGACGCGAAG TCTTTTTTGA TGCTGAGCAC TTTTTTGATG GCTATAAAGA TAACCGTGAC
TTTGCCGTTG CCATGCTTCG TGCAGCCGTT GAAGGCGGCG CAACCCGTCT TGTGCTATGC
GACACCAATG GTGGCACCCT GCCCGACGAA GTAAGCGCCA TTGTTCGCGA TATTGGCTCA
ACCTTCCCAA CCGTTGCTCT TGGCATTCAT AGCCATAACG ATGGCGATGT AGCTGTTGCA
AACTCACTTG CTGCCGTGGT TGCTGGAGCA ACGCACATAC AAGGCACTAT TAACGGCATT
GGTGAACGGT GCGGCAATGC CAACCTTATC AGCATTATTC CTAATGTGCT TTTAAAGTTG
CAACGCACCT GTAACTACGT AGAGCACTTA ACCCAACTTA CGCCGCTCTC AAAATTTGTC
TATGAAATTT TGAACTTACC GGCGAACACA CGCGCTCCGT TTGTTGGTAA GTCGGCATTT
GCCCACAAAG GTGGCATTCA TGTAAGTGCG GTTATGAAGG AGAGTTCGCT CTATGAGCAT
ATTGACCCAA AAGTAGTAGG CAACCATCAG CGCGTGCTTG TGTCGGAACT TGCAGGGCAA
AGCAACATTC GCTACAAAGC GCAAGAGCTT GGCATTGAGC TTCCAGAAAA AAGCGATCTC
TTTAAAAATA TTGTTCATCG CATTAAAGAG TTAGAACATG CAGGCTTTCA ATTCGATGGA
GCCGAAGCCT CTTTTGAGTT GCTCCTACAC CATGAGTTAG GTAACTTCAC TCCATTTTTT
GAAGTGCTTG AAACGAAAGT TCAAATAGAG TCCAGCAAAG AGAATAAAGT GGTAAACCAA
GCCACGTTAA AAGTACAAGT TGGCGATGAC GTTGAACATG TTGTTGCTGA TGGCGATGGT
CCTGTTAACG CGCTTGATAA AGCATTACGA AAAGCGCTGT TACGCTTTTT CCCTGAGATA
AAACAGATCA AGCTTGTTGA TTACAAAGTG CGCGTATTAG AAGAAAAACG AGGTACAAGC
GCTAAAGTGC GCGTGCTGAT TGAATCAAGT AATGGAGAGA CAACATGGGG CACAGTTGGC
GTTTCAACCA ATATTATTGA GGCAAGCTTA CAAGCGTTGC AGGATAGCAT GAATTACCAT
CTCTTTAGTT TGCAGCAAAA AACGCAAGAA CAGAGCTGA
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| Protein sequence | MSLCTTPIEL YDTTLRDGTQ GEHINLSVQD KLLIAQKLDE FGMDFIEGGW PSSNPKDEEF
FLKARHLTFK HARLTSFGST ARSVKAVESD PNLLGLLRSE TPIITIFGKT WQAHSLKSLG
ISDEENAELI YRSVAFLKES GREVFFDAEH FFDGYKDNRD FAVAMLRAAV EGGATRLVLC
DTNGGTLPDE VSAIVRDIGS TFPTVALGIH SHNDGDVAVA NSLAAVVAGA THIQGTINGI
GERCGNANLI SIIPNVLLKL QRTCNYVEHL TQLTPLSKFV YEILNLPANT RAPFVGKSAF
AHKGGIHVSA VMKESSLYEH IDPKVVGNHQ RVLVSELAGQ SNIRYKAQEL GIELPEKSDL
FKNIVHRIKE LEHAGFQFDG AEASFELLLH HELGNFTPFF EVLETKVQIE SSKENKVVNQ
ATLKVQVGDD VEHVVADGDG PVNALDKALR KALLRFFPEI KQIKLVDYKV RVLEEKRGTS
AKVRVLIESS NGETTWGTVG VSTNIIEASL QALQDSMNYH LFSLQQKTQE QS
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