Gene Cag_1893 details

Gene Information

• Locus tag: Cag_1893
• Symbol: dnaK
• ID: 3746792
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: +
• Start bp: 2403753
• End bp: 2405666
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637774430
• Product: molecular chaperone DnaK
• Protein accession: YP_380186
• Protein GI: 78189848
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.457552
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAAAA TTATCGGCAT TGACCTTGGC ACAACCAACT CCTGCGTGGC GGTTATGCAG 
GGTTCACAGC CAACAGTTAT TGAAAATTCT GAAGGTAACC GCACTACTCC ATCGGTTGTT 
GGTTTTACAA AAACGGGCGA TCGCCTTGTA GGGCAAGCCG CAAAACGCCA AGCTATTACC 
AACCCAAAGA ACACCATTTT CTCTATTAAG CGCTTTATGG GACGCCGCTT TGATGAGGTT 
GGAGAAGAAA AGAAAATGGC GCCGTATGAG CTTATTAACG ATAGCGGTGA AGCTCGCGTA 
AAAATCAACG ATAAGGTGTA CTCCCCACAA GAAATTTCAG CGATGGTGCT TCAAAAAATG 
AAGCAGACGG CTGAAGATTT TCTTGGTGAA AAAGTAACCG AAGCTGTTAT TACCGTACCA 
GCCTACTTTA ATGATGCCCA ACGCCAAGCA ACAAAAGATG CGGGACGTAT TGCAGGGCTT 
GAAGTAAAGC GCATTATTAA CGAACCAACG GCTGCGGCAC TTGCTTATGG CCTCGATAAA 
AAGAATGCCA GTGAAAAAGT TGCCGTTTTT GATCTCGGTG GTGGTACCTT CGACATTTCC 
ATTCTTGAGC TTGGCGAAGG CGTTTTTGAA GTAAAATCCA CCGATGGCGA CACCCATCTT 
GGTGGCGACG ACTTCGACCA AAAAATTATT GACTACATTG CTGAAGAGTT TAAAAAGCAA 
GAAGGCATTG ACTTACGTAA AGATGCCATT ACGCTTCAGC GCTTGAAAGA AGCTGCTGAA 
AAAGCAAAAA TTGAGCTTTC ATCGCGTAGT GATACGGAAA TCAATTTGCC CTTTATTACT 
GCAACGCAAG AAGGTCCAAA GCACTTGGTG ATTAACCTTA CTCGGGCGAA GTTTGAAGCT 
ATTTCGGCTG ATTTATTTAA TAAAGTGTTG GATCCATGCC GCCGTGCCGT AAAAAACGCT 
AAAATTGAAA TGCGTGAAAT TGACGAGGTG GTGCTTGTTG GTGGTTCAAC CCGAATTCCA 
AAAATTCAAG CTCTTGTAAA AGAGTTCTTT GGCAAAGAGC CAAACAAAAG CGTGAACCCC 
GATGAAGTGG TAGCAATTGG AGCGGCTATT CAAGGTGGCG TGCTCAAAGG CGATGTTACC 
GATGTGTTGC TGCTCGACGT TACTCCACTT TCGCTTGGTA TTGAAACGCT TGGTGGCGTT 
ATGACAAAGC TGATTGAAGC AAACACCACC ATTCCAACCA AAAAGCAAGA GGTATTCTCA 
ACCGCAAGTG ATAACCAAAC CTCGGTTGAA GTGCATGTGT TGCAAGGTGA ACGCCCAATG 
GCTGCCGACA ACAAAACGCT TGGTCGCTTC CACCTTGGCG ATATTCCACC CGCACCTCGT 
GGCATTCCAC AAGTTGAGGT AATTTTTGAT ATTGATGCTA ACGGCATTTT ACACGTATCA 
GCTAAAGACA AAGCAACCGG TAAAGAGCAA AGCATCCGCA TTGAAGCCAG CAGCAAGCTC 
AGTGATGCTG AAATCAATAA AATGAAGGAT GATGCTAAGC AACATGCTGA TGAGGATAAA 
AAGCGCAAAG AGGAGATTGA TATTAAGAAT AGCGCCGATG CTCTGATTTT CAGCACCGAA 
AAACAGCTTA CCGAACTTGG TGAGAAAATT CCAACCGATA AGAAAAGTGC ACTGGAAGGT 
TCCCTCGACA AGCTCCGTGA TGCCTACAAA AACGGCACCA CCGAATCCAT TAAGAGCGCT 
ATGGATGACC TCAACAGCCA ATGGAACAGC ATTGCCTCCG ACCTTTACCA ATCAGGCGCA 
GGTGCAGCGC AAGCACAACC TGAAGCACCG CAAAACAGTG GTAGCAGCCA AAGCTCAGGT 
GGCGATGGCG CTGTAAATGC CGAGTACGAA GTTATTAACG ATGACAAAAA GTAA 

 

Protein sequence

MGKIIGIDLG TTNSCVAVMQ GSQPTVIENS EGNRTTPSVV GFTKTGDRLV GQAAKRQAIT 
NPKNTIFSIK RFMGRRFDEV GEEKKMAPYE LINDSGEARV KINDKVYSPQ EISAMVLQKM 
KQTAEDFLGE KVTEAVITVP AYFNDAQRQA TKDAGRIAGL EVKRIINEPT AAALAYGLDK 
KNASEKVAVF DLGGGTFDIS ILELGEGVFE VKSTDGDTHL GGDDFDQKII DYIAEEFKKQ 
EGIDLRKDAI TLQRLKEAAE KAKIELSSRS DTEINLPFIT ATQEGPKHLV INLTRAKFEA 
ISADLFNKVL DPCRRAVKNA KIEMREIDEV VLVGGSTRIP KIQALVKEFF GKEPNKSVNP 
DEVVAIGAAI QGGVLKGDVT DVLLLDVTPL SLGIETLGGV MTKLIEANTT IPTKKQEVFS 
TASDNQTSVE VHVLQGERPM AADNKTLGRF HLGDIPPAPR GIPQVEVIFD IDANGILHVS 
AKDKATGKEQ SIRIEASSKL SDAEINKMKD DAKQHADEDK KRKEEIDIKN SADALIFSTE 
KQLTELGEKI PTDKKSALEG SLDKLRDAYK NGTTESIKSA MDDLNSQWNS IASDLYQSGA 
GAAQAQPEAP QNSGSSQSSG GDGAVNAEYE VINDDKK