| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1889 |
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| Symbol | |
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| ID | 3746788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 2401366 |
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| End bp | 2402067 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637774426 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_380182 |
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| Protein GI | 78189844 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTACCTTA AGGTAGCTTT TTCTTTTGGA CGCTACTCAA TGGAGATGGA TGCCGTTATG
ACAAAAAAAA CTATCACTAC AACAAAAACA GCAACCTCCT CGCCACCAAA AGCACTTTCA
GCCGCAGAGC AAAAAAGGCA GCTTGAGTTT CAAAGAGAAG CTATAGTTCA CCTTAACTCG
CTGTACAACT ACGCACTGCA CCTTACCATG AATGCTGATG ATGCAGAGGA TTTAGTGCAA
GAAACTTACC TCAAGGCATA TCGCTTTTTT GATTCTTTTG AAAAGGGAAC AAACTGTAAA
GCATGGCTGT TTAAAATTCT TAAAAACAAC TATATCAACC GCTTCCGTAA AGATACTCGC
GAACCCGGTT TTGTGGATTA TGATGCTATT AAGGATTTTT ACCACACCAT TAAAGATGTT
CAAAGCGACA CCTCCGAAAC CGAGAGTGAT TATTTTCACT CACTACTCCA TGAAGAGGTC
TATCAAGCCC TGAAATCGCT CCCTGAAGAG TTTCGTGAAG TTATTCAGCT TTGTGATATT
GAAGGCTTTA CCTACGAAGA AATTGCCAAC ATGGTTGAAA GCCCCATTGG TACCGTGCGT
TCTCGCCTTT ATCGCGGTCG CAAGTTACTG CATGAACAAC TAAAAGAGTA TGCCGAAAAG
CATGGGTGGC ACATGAATGA TGCCCCAAAT AACCCAGCAT AA
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| Protein sequence | MYLKVAFSFG RYSMEMDAVM TKKTITTTKT ATSSPPKALS AAEQKRQLEF QREAIVHLNS
LYNYALHLTM NADDAEDLVQ ETYLKAYRFF DSFEKGTNCK AWLFKILKNN YINRFRKDTR
EPGFVDYDAI KDFYHTIKDV QSDTSETESD YFHSLLHEEV YQALKSLPEE FREVIQLCDI
EGFTYEEIAN MVESPIGTVR SRLYRGRKLL HEQLKEYAEK HGWHMNDAPN NPA
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