Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1851 |
Symbol | rplC |
ID | 3747232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 2359502 |
End bp | 2360131 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637774389 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_380145 |
Protein GI | 78189807 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.132189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGCGA TTCTTGGAAA AAAAATCGGC ATGACCCGTT TGTTCAACGA AAAACGCGAA GCAGTTTCTT GTACGGTAAT TGAAGCTGGC TCTTGTTTTG TTACGCAAAT TAAGCGCACT GATAAAGAGG GCTACGATGC TTATCAGGTG AGTTATGGTG AGCGTAAAGA ACAGAAAGTG AGCAAGCCAT TACAAGGGCA CTATAAAAAG GCTGGAGTAA CACCTGGCTA TACACTTGTC GAGTTTAGCT TTGCTGAGCT TAATCAGGAG TTAGCGGTTG GCAGTCAAGT GAGCGTTGAA GGTTTTAATG TTGGCGAAAA AGTTAATGTA CTTGGCGTCT CTAAAGGAAA AGGCTTTGCT GGTGTTGTAA AGCGTTACAA CTTTGGTGGT GGCTCAAGAA CTCACGGTCA ATCTGATAGA TTACGAGCAC CAGGTTCTGT TGGTGGCTCA TCTGATCCTT CACGCGTGTT TAAAGGCACA AGAATGGCTG GACGCAAAGG CTCAGCAAAC ATAACGGTAA AAAATCTTGA GATATTCAAG GTTATGCCTG AGTCAAATCT TATTGTTGTT AAGGGTTCAA TACCAGGCCC TAATAATTCA TATGTGAAGA TTATTTCTTC AAAAAAGTAA
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Protein sequence | MGAILGKKIG MTRLFNEKRE AVSCTVIEAG SCFVTQIKRT DKEGYDAYQV SYGERKEQKV SKPLQGHYKK AGVTPGYTLV EFSFAELNQE LAVGSQVSVE GFNVGEKVNV LGVSKGKGFA GVVKRYNFGG GSRTHGQSDR LRAPGSVGGS SDPSRVFKGT RMAGRKGSAN ITVKNLEIFK VMPESNLIVV KGSIPGPNNS YVKIISSKK
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