Gene Cag_1851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1851 
SymbolrplC 
ID3747232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp2359502 
End bp2360131 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content42% 
IMG OID637774389 
Product50S ribosomal protein L3 
Protein accessionYP_380145 
Protein GI78189807 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.132189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGCGA TTCTTGGAAA AAAAATCGGC ATGACCCGTT TGTTCAACGA AAAACGCGAA 
GCAGTTTCTT GTACGGTAAT TGAAGCTGGC TCTTGTTTTG TTACGCAAAT TAAGCGCACT
GATAAAGAGG GCTACGATGC TTATCAGGTG AGTTATGGTG AGCGTAAAGA ACAGAAAGTG
AGCAAGCCAT TACAAGGGCA CTATAAAAAG GCTGGAGTAA CACCTGGCTA TACACTTGTC
GAGTTTAGCT TTGCTGAGCT TAATCAGGAG TTAGCGGTTG GCAGTCAAGT GAGCGTTGAA
GGTTTTAATG TTGGCGAAAA AGTTAATGTA CTTGGCGTCT CTAAAGGAAA AGGCTTTGCT
GGTGTTGTAA AGCGTTACAA CTTTGGTGGT GGCTCAAGAA CTCACGGTCA ATCTGATAGA
TTACGAGCAC CAGGTTCTGT TGGTGGCTCA TCTGATCCTT CACGCGTGTT TAAAGGCACA
AGAATGGCTG GACGCAAAGG CTCAGCAAAC ATAACGGTAA AAAATCTTGA GATATTCAAG
GTTATGCCTG AGTCAAATCT TATTGTTGTT AAGGGTTCAA TACCAGGCCC TAATAATTCA
TATGTGAAGA TTATTTCTTC AAAAAAGTAA
 
Protein sequence
MGAILGKKIG MTRLFNEKRE AVSCTVIEAG SCFVTQIKRT DKEGYDAYQV SYGERKEQKV 
SKPLQGHYKK AGVTPGYTLV EFSFAELNQE LAVGSQVSVE GFNVGEKVNV LGVSKGKGFA
GVVKRYNFGG GSRTHGQSDR LRAPGSVGGS SDPSRVFKGT RMAGRKGSAN ITVKNLEIFK
VMPESNLIVV KGSIPGPNNS YVKIISSKK