Gene Cag_1836 details

Gene Information

• Locus tag: Cag_1836
• Symbol: rplF
• ID: 3746467
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: -
• Start bp: 2352399
• End bp: 2352938
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637774374
• Product: 50S ribosomal protein L6
• Protein accession: YP_380130
• Protein GI: 78189792
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 0.532668
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAGAA TTGGAAAAAT GCCTATACCC CTGAGCAATC AGGCTAAGAT AGAAATCAAC 
GATTCGATTA TCAGGGTGTC GGGGCCGAAA GGTTCTCTTG AGCAAAAACT GACGGATCAG 
GTTATTATTA CTGAAGAAAA TTCCGCACTT CTTGTTCGCC GTATTGATGA TAGCAAAAAG 
GCGCGTGCGC AGCACGGTTT GTATCGTATG CTTATCAACA ATATGGTGCA AGGTGTAACA 
AACGGTTTTA CCACCAAGCT CGAAATTGCT GGTGTTGGTT TTCGCGCTGA AATGAAGGGT 
GAGCTTCTTG CCTTAACTCT TGGGTTTTCT CACCTTATTT ATTTCAAAGC ACCAGAGGGC 
ATTAAACTGG AAACACCTGA TCAAGTAACT GTTCTTATTA GTGGTATTGA TAAGGCGCTG 
GTAGGTCAAG TTGCCGCTAA AATTCGTTCC TTTAAGAAGC CTGAGCCTTA CAGAGGGAAA 
GGTATTAAAT ACTCTGGAGA GGTTATTCGT CGTAAGGAAG GTAAAGCTGC TGGTAAGTAA 

 

Protein sequence

MSRIGKMPIP LSNQAKIEIN DSIIRVSGPK GSLEQKLTDQ VIITEENSAL LVRRIDDSKK 
ARAQHGLYRM LINNMVQGVT NGFTTKLEIA GVGFRAEMKG ELLALTLGFS HLIYFKAPEG 
IKLETPDQVT VLISGIDKAL VGQVAAKIRS FKKPEPYRGK GIKYSGEVIR RKEGKAAGK