| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1831 |
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| Symbol | secY |
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| ID | 3746462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 2349286 |
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| End bp | 2350617 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637774369 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_380125 |
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| Protein GI | 78189787 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.321149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCTTA CGGACAGTAT AAAGAATATC AATAAAATCC CTGAGCTTCG TCAGCGGATT
CTTTATACCC TTCTTCTTTT ATTTATCTAC CGAATTGGTT CTCACATTAC CATTCCAGGA
GTAGATGCTC TTGCGGTTTC AACTGCATCG CAATCACATG CAAATGATTT ATTTGGTCTT
TTTGATCTCT TTGTAGGTGG TGCATTTGCA AGAGCATCTA TCTTCTCTCT CGGTATTATG
CCTTACATTT CAGCCTCCAT TATTGTTCAA CTTTTAGGTG CGGTTACTCC GTACTTTCAA
AAATTGCAAA AAGAGGGTGA AGATGGGCGT CAAAAAATTA ATCAATTGAC GCGCATGGGT
ACGGTACTTA TTGCTATCCT TCAAGCATGG GGGGTTAGTG TAAGTCTTGC TAGTCCAGCC
TCTTTTGGTA AGGTTATTGT GCCCGATCCT GGATTTTTAT TTATTGTTAC CACCATATTA
ATTCTGACGG CATCAACCAT GTTTGTTATG TGGCTTGGTG AGCGTATTAC CGAGAGAGGT
ATAGGGAACG GAATATCACT CATTATTATG ATTGGTATTC TTGCTCGTTT TCCTCAAGCT
GTTGTTGCTG AGTTTCAGTC GGTATCACTT GGTAGTAAGA ATTGGATTAT TGAGATTATT
ATTTTAGCGC TCATGGGTGC AATTGTTGCC AGCGTTATTT TTTTGACGGT AGGCACTCGA
CGCATACCTG TGCAACATGC TAAGCGAGTG GTTGGGCGTA AAGTGTATGG AGGTAATACG
CAGTATATTC CAATGCGTAT TAATACAGCT GGTGTTATGC CTATTATTTT TGCTCAGTCC
ATTATGTTTT TGCCTGCAAC ATTTCTCTCT TTTTTCCCTG AAAATGAAAT GATGCAAAGT
ATTGCTGGTG CATTTGCTTA TGACTCATGG TGGTACGCGC TGATTTTTGG TGCTATGATT
GTATTCTTCA CCTATTTTTA TACAGCGCTT GCATTTAATC CAAAGGATGT TGCCGATACC
ATGCGCCGTC AAGGTGGATT TATTCCTGGT GTTCGTCCTG GTAAAAGTAC CGCTGAGTTT
ATAGAGAATA TTTTAACACG TATCACCTTA CCCGGTGCAA TATCACTTGC GCTTATTGCG
GTGTTGCCAA CGTTTCTAAC AAAGTTTGCT AATGTAACGC CGGGGTTTGC CCAATTTTTT
GGCGGAACAA GTTTACTTAT TATTGTCGGC GTTGGTCTTG ATACGTTACA GCAAGTTGAA
AGCCATCTCT TAATGCGCCA TTACGATGGT TTTATGAAGT CGGGGAAAAC CCGTGGTCGT
CAAGGGAGAT AG
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| Protein sequence | MKLTDSIKNI NKIPELRQRI LYTLLLLFIY RIGSHITIPG VDALAVSTAS QSHANDLFGL
FDLFVGGAFA RASIFSLGIM PYISASIIVQ LLGAVTPYFQ KLQKEGEDGR QKINQLTRMG
TVLIAILQAW GVSVSLASPA SFGKVIVPDP GFLFIVTTIL ILTASTMFVM WLGERITERG
IGNGISLIIM IGILARFPQA VVAEFQSVSL GSKNWIIEII ILALMGAIVA SVIFLTVGTR
RIPVQHAKRV VGRKVYGGNT QYIPMRINTA GVMPIIFAQS IMFLPATFLS FFPENEMMQS
IAGAFAYDSW WYALIFGAMI VFFTYFYTAL AFNPKDVADT MRRQGGFIPG VRPGKSTAEF
IENILTRITL PGAISLALIA VLPTFLTKFA NVTPGFAQFF GGTSLLIIVG VGLDTLQQVE
SHLLMRHYDG FMKSGKTRGR QGR
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