| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1800 |
|---|
| Symbol | |
|---|
| ID | 3746915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 2320903 |
|---|
| End bp | 2322540 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637774338 |
|---|
| Product | electron transfer flavoprotein-ubiquinone oxidoreductase |
|---|
| Protein accession | YP_380094 |
|---|
| Protein GI | 78189756 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins)
[COG2440] Ferredoxin-like protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTTG AACCCGAATC CGTTGACTTC GATATTCTTT TTATTGGTGC AGGTCCAGCG
AATGTAACTG CCGCCATCCA CCTTCAGCGC CTTCTCAACC GCTATAATGA GACTGCCACA
ACAGCGCTTG AACCCTCAAT TGCCATTATT GAAAAAGGGC GTTACGCGAG TGCTCATTTG
CTTTCAGGAG CATTGCTTGA TCCTAAAGCA CTTGAGGAGT TTTTCCCCGA TTATCGCAAC
CAAGGATGCC CCATTGAAGC AACAGTATCC AAAGAGAGCA TCTGGTATGT AAGTGCAAAA
CGGAAGTTCC CCCTGCCATT TATTCCAGAG CAATTCAGTA ATAAAAAATC ACTTATGGTA
TCGCTCAGTA GGCTTGGCGC GTGGTTAGCC GAGCAAGCTG AGGCTGAGGG CATCCAATTG
TTTGATAGCA CTGCGGCTGT TGCTCCATGT ATAGAAAGTG GACGTTTAAC GGGCGTTTAT
ACCGATGACA AAGGGGTGGA TAGTAACGGT GCTCCCAAAG CAAACTATGA GCAAGGATTG
TTGCTTAAAA GTAAGGTTAC CATTGTTGGC GAAGGTGCAG CAGGTTCACT TACGAGGCAG
CTTGCCAAGC ACTTTCCTGC GCTACACGGC AAAACATTGC AACGCTACGA AACAGGTGTT
AAAGAAACAT GGAGCATACC TGAAGGGCGG CTTCAAGCAG GTGAAGTGTA TCATACTTTT
GGCTATCCGC TTGAGCAAGA GCACTATGGT GGTGGATGGG TCTATGCTTT TTCGCCTACT
CTTATTTCGT TGGGATTTGT TTCTTCCCCA AACCAAAGTA ACCCAACCTG CGATCCACAT
GAAAACCTCC AACGTTATAA GCTCCACCCG CTTATTCAGC CAATTCTTGC TGGTGGCAAG
CTGTTAGAAT GTGGGGCGCG AACCATTACT TCGGGCGGTT TAGATGCTAT GCCGCAAATA
TATGGTGATG GATTTTTGCT CACGGGAGAG TCGGCAGGTA TGGTGGATAT GCAGCGCCAT
AAGGGTATTC ACTTGGCGAT GAAGTCGGGC ATGATGGCGG CTGAAACGCT CTTTGACTGC
CTTATTGCCG ATGATTTTTC AACTGCGCAA TTGCAGCGCT ACGAAGAGCG TTTTCGTGCA
TCATGGGCAT ATCAAGAGCT GTATGATGCT CGCAATTACC GCAAAGCGTT TGATAATGGA
TTGTATGCAG GGTTGCTTGC GGCTGGTTTA CAAGTAAATA TTCCGGGACT TTCGTTTGCT
ACAAAGGTGG GGAAAAAAAT AAAACGTGAG CTACCTGAAG CCGATGTTTG TGCTGATGGG
GTTCTTACGT TTACAAAAGA GCGAAGCCTC TTCAACGCCA ATATTCAGCA TGAAGAAAAT
CAACCCTGCC ATCTGCATAT CAATCAAGCC GATATAGAAA ATATTTGCCT AAAGCAATGC
ACTTCACGCT ATGGCAATCC CTGCCAATAT TTTTGCCCTG CTGAAGTCTA TGAAATTGTT
ACGGAACCAA AGTTTGCATT AAAGCTTAAT CCCTCCAACT GCTTGCATTG TAAAACCTGC
GATGTTGCCG ATCCATACGG TATTATCACA TGGACGCCAC CCGAAGGTGG TGGAGGTCCT
GGGTATAAGG TGGGGTAA
|
|---|
| Protein sequence | MNLEPESVDF DILFIGAGPA NVTAAIHLQR LLNRYNETAT TALEPSIAII EKGRYASAHL
LSGALLDPKA LEEFFPDYRN QGCPIEATVS KESIWYVSAK RKFPLPFIPE QFSNKKSLMV
SLSRLGAWLA EQAEAEGIQL FDSTAAVAPC IESGRLTGVY TDDKGVDSNG APKANYEQGL
LLKSKVTIVG EGAAGSLTRQ LAKHFPALHG KTLQRYETGV KETWSIPEGR LQAGEVYHTF
GYPLEQEHYG GGWVYAFSPT LISLGFVSSP NQSNPTCDPH ENLQRYKLHP LIQPILAGGK
LLECGARTIT SGGLDAMPQI YGDGFLLTGE SAGMVDMQRH KGIHLAMKSG MMAAETLFDC
LIADDFSTAQ LQRYEERFRA SWAYQELYDA RNYRKAFDNG LYAGLLAAGL QVNIPGLSFA
TKVGKKIKRE LPEADVCADG VLTFTKERSL FNANIQHEEN QPCHLHINQA DIENICLKQC
TSRYGNPCQY FCPAEVYEIV TEPKFALKLN PSNCLHCKTC DVADPYGIIT WTPPEGGGGP
GYKVG
|
|---|
| |