Gene Cag_1787 details

Gene Information

• Locus tag: Cag_1787
• ID: 3747207
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: -
• Start bp: 2306406
• End bp: 2308271
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637774325
• Product: carbamoyl-phosphate synthase, large subunit
• Protein accession: YP_380081
• Protein GI: 78189743
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
• TIGRFAM ID: [TIGR01369] carbamoyl-phosphate synthase, large subunit

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCACCA TTACGCCCGA CCAAACGGTT CTTACCCTTG CCAAAAAATT GTCTGCCGAG 
CAGCTTTTTG CCGCTAAGCA AAATGGCTTT TCTGACCTGC AGCTTGCCAC TATTTTTAAA 
ACATCCGATA CCGTTATTCG TGAGCTTCGT CGCCATTATG GCATTGCCTC CGTGTTTAAA 
ACGGTTGATA CTTGTGCGGC GGAGTTTGAT GCAAAAACCC CTTATCACTA TTCAACCTAT 
GAAGAGGAAA ATGAGTCGGT TTGCTCTGAT AGGAAAAAGG TGATTATTCT GGGTGGTGGA 
CCTAACCGCA TTGGGCAAGG TATTGAGTTT GACTACTGCT GTGTACAAGC GGTGTTTGCT 
TTGCGAGAAG CGGGTTACGA AACCATTATG GTTAATTGCA ATCCCGAAAC GGTTTCAACC 
GATTACGATA TTGCCGATAA ACTTTACTTT GAGCCGCTTA CCTTTGAGGA TACCATTCGC 
ATTATTGAGC ATGAAAAGCC ACTTGGTGTT ATTGTAAGCT TTGGCGGACA AACGCCACTC 
AAGCTCTCTA CCCGTTTGCA TGAAGCGGGT GTAAAAATTC TTGGCACCTC ATCTAAAGGC 
ATTGACTTAG CTGAGGATCG CAAAAAGTTT GGAGCCTTGC TTGTTGAGCT TGGTATTCCC 
CATCCAGCTT ACGGCACGGC TATTAGTTTG GAAGAGGCAA AAGCCATTAC CCAACGTATT 
GGCTATCCCG CCTTAGTTCG CCCCAGCTAT GTGCTTGGCG GACGTGCTAT GAAAATTGTC 
TATAACGACG ATTCGCTGAA GGAGTACATT GATCAAGCGC TCTTTATTTC CGAAAAATAT 
CCGCTCTTAA TTGATCGCTT TCTTGAAACT GCTGTGGAGT TTGATATTGA TGCCCTTGCC 
GATAGCACCG ATTGTGTGAT TAGCGGCATT ATGCAGCATG TAGAAGCAGC GGGCATTCAC 
AGTGGCGACT CCACCTCCAT TCTCCCTTAC CATAACATTA GCAAGCAGGC AATTGCTGCC 
ATGAAGGAGT ACACCCGAAT GCTTGCTAAA AGCTTGAATG TTATTGGGTT AATGAATGTG 
CAGTACGCTG TGCAAAACGA CACGGTGTAT GTTATTGAGG TGAACCCTCG TGCCAGCCGC 
ACCGTGCCAT TTGTGGGTAA AGCCACCGCT ATTCCGGTGG TAAAAATTGC TACCCGCGTT 
ATGCTTGGCG AAAAGCTCTG CGATTTGCGC AACGAGTACA ATTTAAAGGA TTGCGATGAA 
CTTGGCATGA AGCACATGGC AATTAAAGAG CCTGTTTTCC CCTTCTCGAA GTTTGTAAAA 
TCGGGCGTTT ATCTTGGTCC CGAAATGCGC TCTACGGGTG AAGCTATGAG TTTAGCGAAC 
GACTTCCCCG AAGCTTTTGC AAAAGCCTAT CAAGCCGCAA ATATGCAGCT TCCGCTTTCG 
GGCGCAGTGT TTATTAGTGT GAACGATCAA GATAAAAACC ATCGTATGCT TGCTATTGCT 
CGCTCGTTGT ACGATATGGA TTTTGATTTA GTGGCAACGG CTGGTACATG GCAGTTCCTT 
ACCGATAATG GTATTGAGTG CAAAAAAGTA TATAAAGTAG GTGAAGAGGG GCGTCCCAAT 
ATTTTTGACA GCATCAAACA CGGCAAAGTT GATTTTGTGA TTAATACGCC ACGCGGCGAA 
AAAGCACTGC ACGATGAAGA GGCAATTGGT GCGGCATCAG TGTTAAGCAA CGTGCCATTT 
GTAACCACCA TTGAGGCGGC TGAAGCCTCC GTGCAAGCAA TTGGCTGCAT TCGCCATCAA 
GAGTTTGGGG TAAAGAGCTT GCAAGAGTAT GCAGCGTATC GCGACACAGC TACCGCCACC 
TGTTAA 

 

Protein sequence

MSTITPDQTV LTLAKKLSAE QLFAAKQNGF SDLQLATIFK TSDTVIRELR RHYGIASVFK 
TVDTCAAEFD AKTPYHYSTY EEENESVCSD RKKVIILGGG PNRIGQGIEF DYCCVQAVFA 
LREAGYETIM VNCNPETVST DYDIADKLYF EPLTFEDTIR IIEHEKPLGV IVSFGGQTPL 
KLSTRLHEAG VKILGTSSKG IDLAEDRKKF GALLVELGIP HPAYGTAISL EEAKAITQRI 
GYPALVRPSY VLGGRAMKIV YNDDSLKEYI DQALFISEKY PLLIDRFLET AVEFDIDALA 
DSTDCVISGI MQHVEAAGIH SGDSTSILPY HNISKQAIAA MKEYTRMLAK SLNVIGLMNV 
QYAVQNDTVY VIEVNPRASR TVPFVGKATA IPVVKIATRV MLGEKLCDLR NEYNLKDCDE 
LGMKHMAIKE PVFPFSKFVK SGVYLGPEMR STGEAMSLAN DFPEAFAKAY QAANMQLPLS 
GAVFISVNDQ DKNHRMLAIA RSLYDMDFDL VATAGTWQFL TDNGIECKKV YKVGEEGRPN 
IFDSIKHGKV DFVINTPRGE KALHDEEAIG AASVLSNVPF VTTIEAAEAS VQAIGCIRHQ 
EFGVKSLQEY AAYRDTATAT C