| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1775 |
|---|
| Symbol | |
|---|
| ID | 3746636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 2291651 |
|---|
| End bp | 2293858 |
|---|
| Gene Length | 2208 bp |
|---|
| Protein Length | 735 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637774313 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_380069 |
|---|
| Protein GI | 78189731 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.717267 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGCCC AAATAGACAA AGAGCATTAC CAAAAAATCC ATGAGATTCT TGCCCTTGCG
CGTCGGAACT TAAAAAATGT TGATGAGTCG CTGATTCAGC GTGCCTTTTT TATGTGCTAT
CGGGCGCATG AAGGCGAAAA GCGTGCGTCG GGCGAACCCT TTTTTTATCA CCCTGTGGAG
GTGGCAACTA TTTTGCTTAA CGAGCTGCCG CTTGATGGCG TGTCGGTAGC GGCGGCGTTG
CTGCACGATG TTATTGAGGA TAGCGGTTAC ACGTATGACG ATATTGTGGC TGAGCTTGGC
GTTGAGGTTG CCGACATTGT GGAGGGGCTT ACCAAAATTT CGGGCATAAC CATTAATCGT
GAAACCACGC AAGCTGAAGG GTTCCGCAAA ATGTTGCTTT CAATGGTGAA GGATATTCGT
GTGATCCTCA TCAAGTTTTG CGACCGCTTG CACAACATGC GCACTTTGGA GTCGCTGCCA
GAGCATCGGC GCCTCAAAAT TGCTTTAGAG ACGCGCGATA TATTTGCGCC TCTTGCCCAC
CGTTTTGGTC TCGGCAAAAT GAAGGTGGAG TTTGAAAATT TAGCGCTTAA ATACATTGAT
CCCGAAATGT ATCGCTTTTT GGAGCAGAAG TTGCGCATGA ATAAGGGCGA CCGTGTAAGC
TACCTGAGCA AAATGATTCA GCCCATTAAA AGCGATTTAG AGCAGCAAGG GTTTAAGGTA
GAAGTGCAAG GGCGAGCGAA GCATCTTTTT TCTATATACA ATAAAATGCG CAATAAAAAC
AAGAGCTTTG AGGACATTCA CGACCTCTAT GGCATTCGCA TTATTATTGA TACCGAGCGC
ATTGCCGATT GCTTTTCGGT GTATGGATTT ATTACACAGC AATATCCACC ACTGCCGCAA
TACTTTAAGG ATTACATCTC CATTCCAAAA CATAACGGCT ACCAATCGCT CCATTCAGCC
ATTATTGGAC CAAAAGGCAA TATGGTTGAA ATTCAAATTC GCACCCGACG AATGCACGAG
TTTGCTGAGC TTGGTGTGGC TGCCCATTGG CGTTACAAGG AAAAAATTTC GCAAGATGAT
GCTCATGTTG ATTCTTTTTT GCGTTGGGCG CGTGAGCTTA TTAAGGATGC TGATTCCGCA
ACGGAATTTA TGGAGGGCTT TAAGCTCAAT CTTTACCATG AAGAAATTTA TGTGTTTACG
CCTAAGGGCG ATATGAAAAC ACTACCTGCG GGAGCTACAC CTATTGATTT TGCTTACGCC
ATTCATACCG AAGTTGGGCA TGGCTGCATT GGTGCCAAGG TAAATGGCAA AATTGTGCGG
CTTAATGCCA TTTTAAAGTC GGGCGATAGG GTTGAAATTA TTACCTCCAA AACCTCAAAG
CCCAAAGCTG ATTGGCTGAA CATTGTGGTT ACGCAGCGGG CACAAATGAA AATTCGCTCG
GCTATTAATG AGGATCGCCG CTTGCAAATT GAGAAGGGGC GAAATATTTG GGATAAGTTG
GTGAGCAACA CCAAAAAGCT CTTAACCGAT AATGAAATTG TTCAACAGGC GAAAAAATAT
GGCATTAAAA CGCCGAGCGA CTTTTTTAGC GCATTAGCAA ATCAAGAAAT TAATGGTGAA
GAGGTTTTAG CGCAAGCAAG TGCGGCGAAA AAAGCGGAGC AGCTTACCAA AAGCGTTATG
GATGAGGCGC GTGAGCTTGA TGAATATTTG CAAGCCGCAC GCCAAGAGGC GGAACCTGAG
CAGCAAAAAA TAGCCAGCCG TCGTGATGAA GTGGTTATTG CAGGTATGAG CAACATTGCT
TATTCCTACG CAAAATGTTG CCAACCCGTG CCGGGCGACG ACGTTATTGG TTTTGTGTCA
ACTGATGGCG TGGTGCGCAT TCATCGCAAA AATTGTATTA ACGTTAGCAA CGACAGCCTT
GTAAAAAGCG AGCGAGTTGT TGCGGTAGCG TGGAATCGTA AAATTGATAC GGAGTTTCTT
GCAGGTATTC GCATTATTGG CGAAGATCGG GTAGGCATTA TGAACCAAAT TACAACGGTG
ATTTCAAAGT TAGATGTAAA CATTCGCACC ATTTCGCTTA ATGCCAACGA TGGTATGTTT
GTGGGCATTA TGACTATTTT TGTGCGCAAT GCCGATAAGC TTTCATCGTT AATGGAGAAA
CTTAAAAAGG TGCAAGGAGT GTTTACCGTA GAGCGTTTGA TAAGCTAA
|
|---|
| Protein sequence | MIAQIDKEHY QKIHEILALA RRNLKNVDES LIQRAFFMCY RAHEGEKRAS GEPFFYHPVE
VATILLNELP LDGVSVAAAL LHDVIEDSGY TYDDIVAELG VEVADIVEGL TKISGITINR
ETTQAEGFRK MLLSMVKDIR VILIKFCDRL HNMRTLESLP EHRRLKIALE TRDIFAPLAH
RFGLGKMKVE FENLALKYID PEMYRFLEQK LRMNKGDRVS YLSKMIQPIK SDLEQQGFKV
EVQGRAKHLF SIYNKMRNKN KSFEDIHDLY GIRIIIDTER IADCFSVYGF ITQQYPPLPQ
YFKDYISIPK HNGYQSLHSA IIGPKGNMVE IQIRTRRMHE FAELGVAAHW RYKEKISQDD
AHVDSFLRWA RELIKDADSA TEFMEGFKLN LYHEEIYVFT PKGDMKTLPA GATPIDFAYA
IHTEVGHGCI GAKVNGKIVR LNAILKSGDR VEIITSKTSK PKADWLNIVV TQRAQMKIRS
AINEDRRLQI EKGRNIWDKL VSNTKKLLTD NEIVQQAKKY GIKTPSDFFS ALANQEINGE
EVLAQASAAK KAEQLTKSVM DEARELDEYL QAARQEAEPE QQKIASRRDE VVIAGMSNIA
YSYAKCCQPV PGDDVIGFVS TDGVVRIHRK NCINVSNDSL VKSERVVAVA WNRKIDTEFL
AGIRIIGEDR VGIMNQITTV ISKLDVNIRT ISLNANDGMF VGIMTIFVRN ADKLSSLMEK
LKKVQGVFTV ERLIS
|
|---|
| |