Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1765 |
Symbol | |
ID | 3746625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 2281429 |
End bp | 2283219 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637774302 |
Product | peptide ABC transporter, periplasmic peptide-binding protein |
Protein accession | YP_380059 |
Protein GI | 78189721 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.220703 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGATGA ATAGTATTCT CAAAAAAACC GCCACGTTTC GTCGGTTGGT GGGCGTGGTG GCAACGACGG CGTGTACGCT TTTAACGGCG TGCGGTGGTA GCAATAGCAA ATCTACAGCA CAAGTGGGCA CGCCAGCCAT GGATTCCACC TTGGTGATTG CCATGCTGGG CGATGCCGAT TATCTCAATC CTGTGCTTGC GGGTACAGTA ACCTCAAGCA ATATTGTTGG GCTTATGTCG CCATCGCTGT TGCAAAGTGA GTTTGATACC ACTACGGGGT TGTTGAATTA CATGGCGCTT GAAAAAAAGC TTCGGGCGGG CGGGAGTAGC AGCAAAATGC CACAAGGTGC GGTAGCAAAA AGTTGGACTA TGTCGGCGGA TCACACAACG CTTACCTACA CCTTGCGAAG CGATGCTTTT TGGAGCGATG GCAAACCTGT GGTTGCTGAG GATTTTAAGT TTACCTATCA ACTCTATGGC AACCCGTTGA TTGCAAGTGC TCGCCAACAA TATCTTGCTG AACTTGTTGG TGCCGATAAA GGGCAAATTG ATTTCAACCG TGCCATTGAA GCACCGAACG ATACCACCCT TATTTTCCGC TTTTATAAAC CCGTTCCTGA ACATTTAGCG CTCTTTCATA CCTCACTTGC ACCCTTGCCT GCCCATCAAT GGAAAGGGGT AAAAGCTGAG GAGTTCCGTC AGTCGCCGCT AAATTTGCAG CCACTTTCCG CCGGTCCATA TCGCTTAACG CGCTGGACGC AGCAGCAAGA AATTGTGCTG GGGGCAAATC GCACCTCTAC GCTGCCAAAG CCGGGCAACA TTCCCACCCT AAGCTTTCGA GTGGTGCCCG ATTACACCGT CCGCTTAGCG CAATTACAAA CGGGTGCGGT TGATGTGGTG GAAAATATTA AGCCCGAAGA TTTTTCGACC CTTAAGCAAG CGAAGCAACC GGTTGATATT AAAACACTTG GGCTTCGTGC TTACGATTAC ATTGGGTGGT CAAATATTGA TTTTACGGAG TACCGTAAAA ATCATCGCAT AAAGCCGCAT CCGCTCTTTG GCTCACCAAC AGTACGCCTT GCCTTAACGC AAGCAATTGA TCGTGAAGCT ATTATTGATG GCTACTTGCG CGAGTATGGC GTTGTGTGCA ATACCGATAT TTCGCCATCC TTAAAATGGG CATACAACAA CAAAATTACC CCACACCCTT ACGATCCTGC AAAAGCTAAA GCGTTGCTTG CGGCTGATGG ATGGAAGTAT GGCGCTGACG GAATTTTGCA AAAGCAAGGC AAGCGTTTCA GTTTTGTGCT ACATACCAAT GCTGGCAATG CGCGTCGCAA CTATGCAAGC GTTATTATTC AGCAAAATTT GCGCGCCATT GGTATTGAGT GTAAGCTTGA GGTGCAAGAG TCAAACGTCT TTTTTGAAAA CCTTCAACAG CGCAAGCTTG ATGCGTGGCT TGCAGGATGG GCAATTGGAT TAGAAATTGA TCCGCTTGAT ACATGGGGAA GTAATCTTGA AAAGAGCCGC TTTAACTTTA CGGGCTATCA AAATCCCCGT ATTGAACAAC TTTCAGCGCT TGCCAAGCAA AAAATGGAAC CAACGGGCGC TCGCCCCTAC TGGCTTGAAT ATCAAGAAAT TCTCCATCGC GATCAGCCCA TTACCTTTTT GTATTGGATG AAAGAGACGC ATGGTTTTAG CCGCCGTATT CAAGGCGCAG AGCTGAATAT TGCTGGTGCT TTTTATAACC TTGATGATTG GAAGTTGCAG CCATCAGCTT CCATCCAATA A
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Protein sequence | MVMNSILKKT ATFRRLVGVV ATTACTLLTA CGGSNSKSTA QVGTPAMDST LVIAMLGDAD YLNPVLAGTV TSSNIVGLMS PSLLQSEFDT TTGLLNYMAL EKKLRAGGSS SKMPQGAVAK SWTMSADHTT LTYTLRSDAF WSDGKPVVAE DFKFTYQLYG NPLIASARQQ YLAELVGADK GQIDFNRAIE APNDTTLIFR FYKPVPEHLA LFHTSLAPLP AHQWKGVKAE EFRQSPLNLQ PLSAGPYRLT RWTQQQEIVL GANRTSTLPK PGNIPTLSFR VVPDYTVRLA QLQTGAVDVV ENIKPEDFST LKQAKQPVDI KTLGLRAYDY IGWSNIDFTE YRKNHRIKPH PLFGSPTVRL ALTQAIDREA IIDGYLREYG VVCNTDISPS LKWAYNNKIT PHPYDPAKAK ALLAADGWKY GADGILQKQG KRFSFVLHTN AGNARRNYAS VIIQQNLRAI GIECKLEVQE SNVFFENLQQ RKLDAWLAGW AIGLEIDPLD TWGSNLEKSR FNFTGYQNPR IEQLSALAKQ KMEPTGARPY WLEYQEILHR DQPITFLYWM KETHGFSRRI QGAELNIAGA FYNLDDWKLQ PSASIQ
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