| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1749 |
|---|
| Symbol | |
|---|
| ID | 3746882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 2266628 |
|---|
| End bp | 2268352 |
|---|
| Gene Length | 1725 bp |
|---|
| Protein Length | 574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637774286 |
|---|
| Product | DNA repair protein RecN |
|---|
| Protein accession | YP_380043 |
|---|
| Protein GI | 78189705 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0497] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGCCA GCCTTTCCAT TAAAAATATT GCCTTAATTG AAGAGCTGAC GGTGGTGTTT
CATCCCAGCC TTACTATTAT TACGGGCGAA ACGGGAGCTG GTAAATCCAT TCTTATGGAT
TCATTGAGTT TGGTTATGGG CGATCGTGCA AGCAGTTCCA TGATTCGCAC GGGGGCAAAC
AAAGCGGTTA TTGAAGCTAT TCTTACCGAT GTTCATTCTG AAACTATTGA AGCGCTGTTA
GCTGATGCTG CAATTGATAG CCGTCAGGGT GAATTGATTT TGCGCCGTGA GCTTGCAGCA
AATGGGCAAT CGCGTTGCTT TATGAACGAT ACGCCTTGTA CGCTTTCGCT ATTGCGCCAA
GCGGCTGAAG AGCTTATTGA CCTACATGGG CAGCATGAGC ATCAATTGTT GCTTCGCAGT
GCAACGCACG AAGGGTTGCT TGATGATTTT GCACAAGCCC ACCATGAACG TGCCACCTAT
AGCCGTTGCT ATCAGCATTT GCAACAATTA CAAGCGCAAC GCTCAGCTTT AGTGGAGAAG
GCACAAAGCC TTCGCGACAA AAAAGAGTTC CTTGATTTTC AGTTGCAAGA GCTACAAAGC
GCTCAGTTAC AAGAGGGTGA AGAAATAAAT ATTGAGCAAG AAATTACCTT GCTTGAAAAT
GCTGAACAGC TTTTTACCCT TACCACCTTG CTGCATGAAA CACTTTACAA TAGTGATAAT
TCGGCATACA GTAATCTTAC GGCAGCCTTA CACACCCTTG AAAAGTTAGC AACCATTGAC
CAACGTTTTG CTTCAGCCAT TGAGGAAGCG CGTGCGGCTA CTACCATAGT TGATGAGTTG
GCGCGATTTG CTCGCAGCTA TAGCGCTGAT GTTGAGTTTA ATCCCGAACG GCTTGAAGAG
TTGCGCGAAC GCCAATTGCT GCTTCAGCGC ATGTGCCGCA AGTATGGGCG CACCCATGCC
GAATTGATAG CCTTTGAGCA AGAGCTTTGT GCCGAGCAAG CTGGCGCTGA AAGCCTTGAT
GATGAGCTTC GGCAACTTGA AATGGCAATT GTTACTGAAA AAAAGCAGTT GTCGCAGCTT
GCGATAATTT TAAGCGAAAA GCGGCAAAAA GCGGCAACGC TCTTAGAGGC ACATTTACAG
CAAGAGCTTG CTTTGCTTGG AATGCCTCAT GCTCGTTTTG CTATTAGCAT AACACAGCAA
GAAAAAGCTG ATGGCGATAT TGCGGTTGCA GGCAACCATT TTGCCGCTAC TCGCACAGGA
TATGACACAG TTGAATTTCT CCTTTCGGCT AATCAGGGTG AAACAGCTCG TCCGCTCACC
AAAGTTGCTT CGGGTGGCGA AATTTCACGT GTGATGCTGG CATTGAAAAG CGCACTTGCC
ACCTCAACGC ACTTGCCGAT TTTAGTGTTT GATGAAATTG ATACGGGTAT TAGTGGACGT
ATTGCCGAGT CGGTGGGAAA AAGTTTAAAA AAACTCTCTC GCCTGCACCA AATTATTGCT
ATTACCCATC TTCCTCAAAT TGCGGCTATG GGCGACTTAC ACCTGAGTGT CCAAAAAAGC
GTTCGTGAAA ACCGCACCAC CACCAGCGTT ACACCGCTTG ATGGCGAAAG CCGCTTACAC
GCCATTGCGA GTTTAATGAG CGGTGAACAA ATTTCCGCTA CATCGCTTAA CCTTGCTGCT
GAATTGTTAG CTCATGGGCA GGCGGTTAAC CTTCCCTCTA TTTGA
|
|---|
| Protein sequence | MLASLSIKNI ALIEELTVVF HPSLTIITGE TGAGKSILMD SLSLVMGDRA SSSMIRTGAN
KAVIEAILTD VHSETIEALL ADAAIDSRQG ELILRRELAA NGQSRCFMND TPCTLSLLRQ
AAEELIDLHG QHEHQLLLRS ATHEGLLDDF AQAHHERATY SRCYQHLQQL QAQRSALVEK
AQSLRDKKEF LDFQLQELQS AQLQEGEEIN IEQEITLLEN AEQLFTLTTL LHETLYNSDN
SAYSNLTAAL HTLEKLATID QRFASAIEEA RAATTIVDEL ARFARSYSAD VEFNPERLEE
LRERQLLLQR MCRKYGRTHA ELIAFEQELC AEQAGAESLD DELRQLEMAI VTEKKQLSQL
AIILSEKRQK AATLLEAHLQ QELALLGMPH ARFAISITQQ EKADGDIAVA GNHFAATRTG
YDTVEFLLSA NQGETARPLT KVASGGEISR VMLALKSALA TSTHLPILVF DEIDTGISGR
IAESVGKSLK KLSRLHQIIA ITHLPQIAAM GDLHLSVQKS VRENRTTTSV TPLDGESRLH
AIASLMSGEQ ISATSLNLAA ELLAHGQAVN LPSI
|
|---|
| |