Gene Cag_1747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1747 
Symbol 
ID3746880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp2265522 
End bp2266160 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content45% 
IMG OID637774284 
Productphosphatidylserine decarboxylase 
Protein accessionYP_380041 
Protein GI78189703 
COG category[I] Lipid transport and metabolism 
COG ID[COG0688] Phosphatidylserine decarboxylase 
TIGRFAM ID[TIGR00164] phosphatidylserine decarboxylase precursor-related protein 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCACTT CCTACGGAAC AAGTACCATA GTAAAAACAA CACTGCTGTG CTTATTAATG 
TGTGTGGTGG CATTGTTTAT ACCGTTTATC GCGCAAGTGT GGCTTATAGG CTTTGCGGTC
GTTTTTTTGC TCTTCACGCT CTATTTTTTT CGCGATCCTG AGCGTAAAAC GCCCAATGAA
ACAGCCATTA TTGTGTCGCC TGCCGATGGC AAAGTAATGC AAATTGCGCC ATGCACGCTA
CCTGATAGTG GACTACCAGC AACGCGCGTT TCCATTTTTA TGTCGCCCTT TAACGTCCAT
GTTAATCGGG TGCCAATCAG CGGCAAGGTA ACAATGGTGC GCTATGTGCC GGGTAAATTT
TTAATGGCGT TTGACCATGC CAGCATGGAG CATAATGAGC GCATGGAAAT TGCTCTTGAT
AATGGACAAT TTGAAGTGCG CTTTAGCCAA GTTTCAGGTT TTATAGCTCG ACGTATTGTA
TGTACGTTAC AACCAAATGA TGTTGTTACT ATTGGCAGAC GCTTTGGAAT GATTAAGTTT
GGTTCGCGTG TTGATATGGT GCTGCCAGCT ACGGTGCGCT GCTGCGTTCA GCAAGGTGAT
AACGTTCATG CAGGTGAAAC TATTATCGGG CGTTATTAA
 
Protein sequence
MLTSYGTSTI VKTTLLCLLM CVVALFIPFI AQVWLIGFAV VFLLFTLYFF RDPERKTPNE 
TAIIVSPADG KVMQIAPCTL PDSGLPATRV SIFMSPFNVH VNRVPISGKV TMVRYVPGKF
LMAFDHASME HNERMEIALD NGQFEVRFSQ VSGFIARRIV CTLQPNDVVT IGRRFGMIKF
GSRVDMVLPA TVRCCVQQGD NVHAGETIIG RY