| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1712 |
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| Symbol | rplT |
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| ID | 3746978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 2225816 |
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| End bp | 2226163 |
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| Gene Length | 348 bp |
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| Protein Length | 115 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637774249 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_380006 |
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| Protein GI | 78189668 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0580662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTAAAG CCAATAATGC CGTAGCTTCA CGAGCACGGA GAAAAAGAAT ATTAAAGAAA
GCCAAAGGAT TTTGGGGAGC GCGTGGTAAC GTTTTAACCG TTGTAAAGCA CTCCGTTGAT
AAAGCCGAAC AATATGCCTA CCGTGATCGT CGCGCTAAAA AGCGTACCTT CCGTTCACTT
TGGATTATGC GTATTAACGC TGCTGCCCGC TTAAACGGCA CCACCTACTC GCAGCTTATT
AATGGTATGG CAAAAAACAA TATTCAAATT GACCGCAAAG CCCTTGCTGA AATTGCAGTA
AAAGATGCAG CCGCATTCAG CGCAATTGTG CAAGCCGCTA ACAAATAA
|
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| Protein sequence | MPKANNAVAS RARRKRILKK AKGFWGARGN VLTVVKHSVD KAEQYAYRDR RAKKRTFRSL
WIMRINAAAR LNGTTYSQLI NGMAKNNIQI DRKALAEIAV KDAAAFSAIV QAANK
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