Gene Cag_1702 details

Gene Information

• Locus tag: Cag_1702
• ID: 3746968
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium chlorochromatii CaD3
• Kingdom: Bacteria
• Replicon accession: NC_007514
• Strand: -
• Start bp: 2211573
• End bp: 2212253
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637774239
• Product: TPR repeat-containing protein
• Protein accession: YP_379996
• Protein GI: 78189658
• COG category: [R] General function prediction only
• COG ID: [COG4783] Putative Zn-dependent protease, contains TPR repeats

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAAAAT TAGGTAAAGG GGTTTCTACT CAACCCTCAA TTGGCAGAAT AGGTGGTGAG 
TGGTATATTG GAGGCATGAA ACAATCATTT AAGCATCAAG CGCTACGGCG CATAAAAAAA 
GGAGCCCTCC TCCTTTGTAT TTTCGCTGCA ACTACCCTTA CGGCGTGCAG CAATAATGAG 
CTGGAAAAGC TTCAGCAAGA GGCGTGGAAA AATCCTAACG ATGCGGCGTT AACGCTACAA 
CTTGGTTACA AGTATGCTCA AGAAGGGCGT TACATGGAGG CTAATGAATC GTTTCAAAAA 
GTATTGGCGC TTGACCCAAA GCGCGATGAA GCGTTGCAAG CGTTAGGTGC TACAGCCTTC 
CGCCAAAAGC AGTACAGTCA AGCTATTTCA TACTTTCAGC AGCATCTTGA GCGCGCCCCT 
GCTGACTCGG CTCGACTTTA CAATCTCGGT AATGCGTATA TGCAACTAAA GCAGTATGAC 
AAAGCTACTG AGCTTTATAA TAAAGCAATT GATAATAGCA CTGCCTTTAT TGATGCTCAT 
TACAATTTAG CGGTGTGTTA TGCTAAAACA GGACGGCGTA ATGAGGCTCA GGCAATTTAT 
GAGTGGCTTC TTACTAAAAA CAATTATCTT GCCACCTCAT TACAAAAGCA TCTTGATAAA 
GAGAATCAAG CACCAAAGTA A 

 

Protein sequence

MLKLGKGVST QPSIGRIGGE WYIGGMKQSF KHQALRRIKK GALLLCIFAA TTLTACSNNE 
LEKLQQEAWK NPNDAALTLQ LGYKYAQEGR YMEANESFQK VLALDPKRDE ALQALGATAF 
RQKQYSQAIS YFQQHLERAP ADSARLYNLG NAYMQLKQYD KATELYNKAI DNSTAFIDAH 
YNLAVCYAKT GRRNEAQAIY EWLLTKNNYL ATSLQKHLDK ENQAPK