Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1695 |
Symbol | |
ID | 3746384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 2200966 |
End bp | 2202000 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637774232 |
Product | reverse transcriptase family protein |
Protein accession | YP_379989 |
Protein GI | 78189651 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.517212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCGCA AGGGGAAATT GGTTGAGCAG ATTGCTGACC TGCATAATCT TTATGAAGCT TTTTATAAGG CTCAAAAAGG AAAGCAAGCG AAGCGTTATG TGTGTGCATA CAGAAAGCAG TTGCAGGAAA ATTTACAGCT CTTGCGCCAT CAAATTCTTT CAGGTGCTAT TCAAACGGGC AAGTATCACG CTTTTACCAT TTACGACCCT AAAGAGCGGG TGATTTGTGC TACCCCGTTT TCGCAGCGGG TTTTGCATCA TGCCATTATG AATGTGTGCC ATCCTTTTTT TGAAAAGCAT CAAATTGCTG GGAGTTTTGC AAGCCGTAAA GGAAAAGGCA CGTATGCAGC GCTTGATAAA GCAAGAGAGT ACAACTGTTG CTATCGTTGG TTTTTAAAGC TTGATGTCCG CAAATATTTT GATAGCATTA ACCACACGGT TTTGCAAAAG CAACTTACTC GTCTTTTTAA AGACAAAACA TTGCTCTTGA TATTTGAGCA GATTATTGAC AGCTATTCCA CTGCTGACCA TAAAGGTGTG CCAATTGGTA ACCTAACAAG CCAGTACTTT GCTAACCACT ATCTCTCGGT GGCTGACCAT TACGCAAAAG AGGGGTTGCG TGTTCCCGCT TACGTTCGCT ATATGGACGA TATGGTGTTG TGGCATAACG AAAAAGAGGA GTTGCTGGCA ATGGGCTACA TGTTTCAAAC ATTTATTGCA AAAGAGCTGT TGCTTGAGCT TAAGCCGTTT TGCTTGAATG CAACGCACAA AGGGTTACCA TTTCTTGGGT ATTTACTTTT TGAAAATCAA GCGAGGCTGG CACCACGAAG CAAAAAGAGG TTTCTTGCAA AATATCAGCG CTATGAAAAC AATTTGCAGT CGGGCGTATG GACGCAGCAA GAATTTGCAA AACATGCTTT ACCGCTTTTT GCTTTTACGG AGTATGCTCA AGCAAGAGAA TTTCGCAAAA AAAGCTTACA CTCTTTTTGT TCTTTGGAAG GAGTCTTTGT AAGGAGCAGT AAGGGCATTG ATTGA
|
Protein sequence | MKRKGKLVEQ IADLHNLYEA FYKAQKGKQA KRYVCAYRKQ LQENLQLLRH QILSGAIQTG KYHAFTIYDP KERVICATPF SQRVLHHAIM NVCHPFFEKH QIAGSFASRK GKGTYAALDK AREYNCCYRW FLKLDVRKYF DSINHTVLQK QLTRLFKDKT LLLIFEQIID SYSTADHKGV PIGNLTSQYF ANHYLSVADH YAKEGLRVPA YVRYMDDMVL WHNEKEELLA MGYMFQTFIA KELLLELKPF CLNATHKGLP FLGYLLFENQ ARLAPRSKKR FLAKYQRYEN NLQSGVWTQQ EFAKHALPLF AFTEYAQARE FRKKSLHSFC SLEGVFVRSS KGID
|
| |