| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1689 |
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| Symbol | |
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| ID | 3746379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | - |
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| Start bp | 2192915 |
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| End bp | 2195101 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637774227 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_379984 |
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| Protein GI | 78189646 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGTTC AAAAATCAAT TGATCTTGGT CACGGCAGGA TTCTTTCTAT CGAAACGGGC
AAAATGGCAA AGCAAGCCGA TGGTGCTGCT ATTGTGCGTC TTGGCGATAC TATGGTGCTT
GCCACAGTGG TTTCAAGCAA AAAAACTCCT CCATTAGGTC AAGATTTTTT TCCGTTACAG
GTTGAGTATC GTGAAAAATA TTCCGCTGCT GGTCGCTTTC CCGGAGGCTT TTTTAAGCGC
GAAGGTCGTC CTTCTGAAAA AGAAATTCTT TCTGCCCGCT TAATTGACCG TGCCCTTCGT
CCTCTCTTTC CTGACGGCTA TTACTACGAA ACCCAAATTA TTATTTCAGT TATATCATCC
GATCAAGTAA ATGATGGTGA TGTGCTGGGT GGTCTAGCTG CCTCTGCTGC CATTATGGTT
TCCGATATTC CTTTCCAAAA CCCTATGTCG GAAGTGCGTG TTGGGCGTGT TAATGGCTTG
TACATTATCA ACCCCGATGT TAACGAACTA AAAGAGAGCG ATATTGATAT GTGCATTGGT
GGTACCAACG ATACCATTTG TATGCTTGAG GGTGAAATGA ATGAAATTTC GGAAACTGAA
ATGCTTGAGG CTATTCAGTT TGGGCACACT GCCATTCGCA AGTTATGTGT GTTGCAACAA
GAGGTTGCCG CTGAAGTTGC TAAGCCAAAG CGCCTCTTTG TTCCAACCGT TATTCCAACT
GAGCTTGATA GCTTTGTGCG TGCCAATTGC CAAAGCCGTT TACGCGAGTT GGCTTACACG
CCGCTTGGCA AAGAGGAGCG TGCTGAGCGC ACGGCTGCAA TTTATAACGA AACCTTAGCG
GCTACGTTAG AGCATTTTCG TGCTACCATT AGCAGCGAAG AGGCACAAGC TGATACTGCA
AAAGCGCTCT GCTTAAATGA GCATATTATT GAAGATCAAA TTCATGCAGT TGAAAAAGAG
GTGATGCGCC ACATGATTCT TGATGATGCA AAGCGTCTTG ATGGACGTGC GCTTGATCAA
GTTCGCCCCA TTACCATTGA GCTTGGGCTT ATTCCTCGTG CTCACGGCTC GGCACTCTTT
ACGCGTGGTG AAACGCAAGC GCTGGTAACT CTAACGCTTG GCACCCAAAA AGATGCGCAA
TCGGTTGATA ACCTCACTAA TAGTGATGAC AAGCGCTTTT ACCTTCACTA CAATTTTCCC
CCATTTAGCG TTGGCGAATG TGGACGTCTT GGCAGCATTG GTCGCCGCGA AATTGGGCAT
GGCAATCTTG CAGAGCGTTC TATTAAAATG GTTGCCCCTA CTGAAGCCGA ATTCCCTTAC
ACTATCCGCA TTGTTTCCGA CATTCTTGAA TCAAACGGTT CATCTTCAAT GGCATCGGTG
TGTGGAGGAA CTTTAGCGTT GATGGATGGC GGCGTTCCCA TTAGAAAGCC GGTGTCGGGT
ATTGCAATGG GATTGATTAA AGAGAATGAT AAGTATGCGG TGCTCTCCGA CATTTTAGGC
AACGAGGATC ACCTTGGCGA CATGGATTTT AAAGTTTCCG GTACGCGTGA TGGCATTACT
GCCTGCCAAA TGGATATTAA AATTGATGGG CTTGATTACC ACATTGTGGA AAATGCTCTT
GAGCAAGCTC GCAAAGGGCG CCTCCATATT CTTAATGAAA TGGAAAAAGC CATTCCAGCA
TCACGTACCG ATTTAGCAAC TTATGCACCA CGTTTAACCA CCATTAAAAT TCCTTCCGAT
TGCATTGGCA TGGTGATTGG TAAAGGTGGC GAAACCATTC GTGGCATTAC CGAAGAGACG
GGTGCTGAAA TTAATATTGC CGATGATGGC ACCGTAACCA TTGCGTGTAC GACCAAAGAG
GGCACCGATG CAGCCTTAGC TACCATCAAA AGCCTGACTG CAAAACCTGA GGTTGGCAAC
ATTTACGTTG GCAAAGTGCG CGACGTGCGC GATGAACTTG GTGCCTTTGT AGAGTTCCTG
CCAAAAACCG ATGGCTTGGT ACACATTTCG GAAATTTCGT CAACTCGTGT GGCTAAAGTA
AGCGATCACT TAAAGGTAGG CGATAAAGTT ACCGTCAAAT TAGTTGATGT TCGCAAAGAC
CCACGCACCG GTAAAACGAA GTTCGCCCTT TCAATTAAAG CGCTTGAGCA GCCAAAACAA
GAGGGTGGCG AAGCAACGCA AAACTAA
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| Protein sequence | MFVQKSIDLG HGRILSIETG KMAKQADGAA IVRLGDTMVL ATVVSSKKTP PLGQDFFPLQ
VEYREKYSAA GRFPGGFFKR EGRPSEKEIL SARLIDRALR PLFPDGYYYE TQIIISVISS
DQVNDGDVLG GLAASAAIMV SDIPFQNPMS EVRVGRVNGL YIINPDVNEL KESDIDMCIG
GTNDTICMLE GEMNEISETE MLEAIQFGHT AIRKLCVLQQ EVAAEVAKPK RLFVPTVIPT
ELDSFVRANC QSRLRELAYT PLGKEERAER TAAIYNETLA ATLEHFRATI SSEEAQADTA
KALCLNEHII EDQIHAVEKE VMRHMILDDA KRLDGRALDQ VRPITIELGL IPRAHGSALF
TRGETQALVT LTLGTQKDAQ SVDNLTNSDD KRFYLHYNFP PFSVGECGRL GSIGRREIGH
GNLAERSIKM VAPTEAEFPY TIRIVSDILE SNGSSSMASV CGGTLALMDG GVPIRKPVSG
IAMGLIKEND KYAVLSDILG NEDHLGDMDF KVSGTRDGIT ACQMDIKIDG LDYHIVENAL
EQARKGRLHI LNEMEKAIPA SRTDLATYAP RLTTIKIPSD CIGMVIGKGG ETIRGITEET
GAEINIADDG TVTIACTTKE GTDAALATIK SLTAKPEVGN IYVGKVRDVR DELGAFVEFL
PKTDGLVHIS EISSTRVAKV SDHLKVGDKV TVKLVDVRKD PRTGKTKFAL SIKALEQPKQ
EGGEATQN
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