| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1679 |
|---|
| Symbol | |
|---|
| ID | 3747273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 2179263 |
|---|
| End bp | 2180627 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637774217 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_379974 |
|---|
| Protein GI | 78189636 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0510634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCATA TTTCATCAGC ACTATATCGC TACGCATTCC ATAGTGCAGC GCTTTGCACC
ATGCTTTACG TAGCCGCGCC GCTTCACGTT GTGGCGGCAG CGGAGAGTGT GGGAACTCGA
AAAGCGAACG TGCAGGAAGC CCCTTTTCTT ACCACCTCTC TTAGTAATGC AACGCCTTAT
GTTGGTGAGG AAATTACCAT TCACTACACC CTCTACTTCC AAGAAATAGC GCCAAAAATT
GTACGCGAAA GCCAGCCTTC CATGCAAGGC TTATGGGCGC AAGCGAGCAA TCCTGACCGC
TTTATTAACA GTAAATCAGT ACAGTTTAAA GGCAAAGCGT ACCGCAGTGC CGTTATTAAA
AGCTATAGAG TAGCGCCCTT GCAAAGTGGG CAATTGCCTA TTGATGGCTA CACCATGCAC
TATGTGCTCT CTGAAAATGA GGGTGAAGGC GAAAAAAGTA TTACTGCACC ATCTGTTGCC
ATTACTGCAC GTCCATTGCC ACAGCCTATT CCGCAAGGCT ACAGTGGTGC AGTTGGAACC
TTTTCCATAG CCCAGCACTC CTCTGCACAG CAGGTGCGCG TTGGCGAACC ACTTACAGTA
ACCCTCACCA TTAACGGTAC GGGCAACCTT TTTACCGTAA CGCCGCCTAC CCTCAGCGTT
CCTGCAAGTT TTCGTGCCGA TACGCCCAAT AAAAAAATAG AGGTGAATTC TGACGCAAAC
GCCAAAAGTG GTTCTATTAC CTTAACCCAA ACCATTTGGG CGGAACAAGC GGGTAGCTTT
ACTTTGCCAG CTTGTTCTTT TATTGCTTTT AACCCAAACA GCAAAAGTTT TGCAACGTTG
CGAACTGAGC CGCTTACCAT AATTGTTACC CCAGCATTGC AAAGTGGAGG TCAGTCAGCA
AGTAAAGGCG ATTCGCTCTC CTCAAGCATG GCAGCTTCTG AGGATGGTAC GGCAGCCTCG
TTTCCCGTTA TTCCTGCCGT TGCTGGAGCG TTGATTGTTA TAATGGCTGG AGTTGGAGCA
TGGCTACTAC GCCACCGCAA AGGGAGCGCT CAAACCTCCA TCGAAGGCTC TGTGCCAAAA
AGTAGTGTTG CAATTACTGC CCGATCGGCT AAAGAGCAAC TTTTTGCACA ATTACACCTT
GTAGGCATTA AGCATCCTAA CGGTTTAACT CGTAGTGAAT TGCTGCAAGC GCTCTGCACC
ACTCGTCTTT CTCCCGAAAT GCAGCAGCAA TTTATGGCAT TGCTTGATGC CTTAGATGCT
CTGCTTTACG CACCCGGTGC GGCTAATCCA CTCTTAACAC CTGAACTTGC CGAGCGCTTT
ATTCTGTTTG ATAAAGAGTT AAACCAAACG TATAGCGCCA GCTAA
|
|---|
| Protein sequence | MRHISSALYR YAFHSAALCT MLYVAAPLHV VAAAESVGTR KANVQEAPFL TTSLSNATPY
VGEEITIHYT LYFQEIAPKI VRESQPSMQG LWAQASNPDR FINSKSVQFK GKAYRSAVIK
SYRVAPLQSG QLPIDGYTMH YVLSENEGEG EKSITAPSVA ITARPLPQPI PQGYSGAVGT
FSIAQHSSAQ QVRVGEPLTV TLTINGTGNL FTVTPPTLSV PASFRADTPN KKIEVNSDAN
AKSGSITLTQ TIWAEQAGSF TLPACSFIAF NPNSKSFATL RTEPLTIIVT PALQSGGQSA
SKGDSLSSSM AASEDGTAAS FPVIPAVAGA LIVIMAGVGA WLLRHRKGSA QTSIEGSVPK
SSVAITARSA KEQLFAQLHL VGIKHPNGLT RSELLQALCT TRLSPEMQQQ FMALLDALDA
LLYAPGAANP LLTPELAERF ILFDKELNQT YSAS
|
|---|
| |