| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1640 |
|---|
| Symbol | |
|---|
| ID | 3747947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | - |
|---|
| Start bp | 2137992 |
|---|
| End bp | 2139290 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637774178 |
|---|
| Product | ribulose-bisphosphate carboxylase large chain |
|---|
| Protein accession | YP_379935 |
|---|
| Protein GI | 78189597 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGAG AGGATATTAA CGGTTTTTTT GCCTCAAAAG AGCAGCTCAA TATGGCTGAC
TATCTCATAC TCGACTACTA TTTAGAGTGC GTTGGAGATA TTGAGACCGC CCTTGCTCAT
TTTTGTAGCG AGCAATCAAC CGCTCAGTGG AAGCGGGTAG ATTATGACGA GGATTTTCGT
CCAAAACATG CTGCAAAGGT TATTAGCCTA ACGGTTGAGG CAGAGCTATC CTCGTTAAGC
TATCCTATTC ATCATGCAAC CGACGAGCCA ATTCACGCCT GCCGTGTAAC GATTGCTCAT
CCGCATACTA ATTTTGGTAC CAAGCTGCCA AATTTGCTTT CAGCCGTATG TGGCGAAGGA
GCCTTTTTTA CGCCGGGGGT TCCTGTGGTA AAGTTGCTTG ATATCCATTT CCCAGACTCT
TATTTGCAAG CGTTTGAAGG ACCAAAATTT GGCATTGATG GCATTCGCGA TCTTTTAAAA
GCCTACAATC GCCCTATCTT TTTTGGCGTA GTAAAACCTA ATATTGGCTT AAGCCCTGCC
GAGTTTGGTG AAATTGCTCG CCAAAGTTGG CTTGGTGGAC TTGATATTGC CAAAGATGAT
GAAATGCTTG CCGATGTAAC ATGGTCAAGC CTTGCCGATC GTTCTCGTGA GCTTGGCGAA
GCACGGCGCA ATGCCGAACA AGCTACGGGC GAGCCAAAGG TCTATCTTGC CAACATTACC
GATGAAGTTG ATCGTTTACT TGAGCAGCAC GATGTTGCCG TCCGCAATGG AGCCAATGCA
CTGCTTATTA ATGCCTTACC CGTTGGTTTA AGTGCGGTGC GTATGCTTGC AAAGCATACA
AAAGTGCCGC TGATTGGCCA TTTTCCTTTT ATTGCAGCGT TTAGCCGTTT AGAGAAATTT
GGTGTGCACT CTCGTGTTAT GACCAAATTG CAACGCCTTG CAGGGCTTGA CTCCATTATT
ATGCCGGGCT TTGGCAGTCG CATGATGACT ACCGAAGAGG AGGTTATGGC AAATGTGCAA
GAGTGCTTGC AAGATTTTGG TCATCTCCGC CGTTCATTGC CGGTACCGGG TGGCAGCGAT
TCTGCACTAA CGCTTGAGGG GGTATATCGT AAAGTGGGAA GTGTGGACTT TGGTTTTGTA
CCGGGGCGTG GCATTTTTGG TCATCCTATG GGTCCAAAAG CAGGTGCCGC AAGTATTCGC
CAAGCATGGG AAGCTATTGA GCAAGGTGTG CCGTTAGAAA CCTATGCCCA AGGACGCCCT
GAACTGCAAG CAATGGTTGA TGGCGCTCAC GGCAAATAA
|
|---|
| Protein sequence | MNREDINGFF ASKEQLNMAD YLILDYYLEC VGDIETALAH FCSEQSTAQW KRVDYDEDFR
PKHAAKVISL TVEAELSSLS YPIHHATDEP IHACRVTIAH PHTNFGTKLP NLLSAVCGEG
AFFTPGVPVV KLLDIHFPDS YLQAFEGPKF GIDGIRDLLK AYNRPIFFGV VKPNIGLSPA
EFGEIARQSW LGGLDIAKDD EMLADVTWSS LADRSRELGE ARRNAEQATG EPKVYLANIT
DEVDRLLEQH DVAVRNGANA LLINALPVGL SAVRMLAKHT KVPLIGHFPF IAAFSRLEKF
GVHSRVMTKL QRLAGLDSII MPGFGSRMMT TEEEVMANVQ ECLQDFGHLR RSLPVPGGSD
SALTLEGVYR KVGSVDFGFV PGRGIFGHPM GPKAGAASIR QAWEAIEQGV PLETYAQGRP
ELQAMVDGAH GK
|
|---|
| |