Gene Cag_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCag_1625 
Symbol 
ID3747933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium chlorochromatii CaD3 
KingdomBacteria 
Replicon accessionNC_007514 
Strand
Start bp2124104 
End bp2124622 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content46% 
IMG OID637774164 
Producthelix-hairpin-helix DNA-binding, class 1 
Protein accessionYP_379921 
Protein GI78189583 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATGGC TCAATTCATT AGCAACAAAG CTTAGCCTTA CAAAGGCAGA AATAACGTTA 
ATTACCGCAT TGCTTGGCTT TTTACTGCTT GGCGGTGTGG TAAAAAATTT TCAGGATGTT
GAAGAGCGTA CCACCCTCAT CAAGCGAGCT GAAGCCGCAC GTTTGGATGG GGCTGAAGTT
GATAGTTTGC TGCGCCTTGC TTCGTTAAAA GAGGGCGATT TATCGGCTGA GCCTGTTGCA
GAGCAGGCTG AAGAGGGCGA GGTTGCACCA TCAACCAAGA AAAAAAGTAA AAGCGCACGG
AGCGAAAAAA AAGAGTTTCA CGGCACCGTT GCCTTTAACA AAGCTTCAGC CGCACAGTTG
CAGAAAATAC CGGGCGTTGG TACTGTTATG GCTGAGCGCA TGATTGCGTT TCGATTGTTA
AAAGGGGGAA AAGTGAGTGA TATGAAAGAG CTGTTGGAGG TAAAAGGCAT TGGTGCCAAA
AAACTTGAGC AACTGCAACC CTATCTGACG CTTGATTAA
 
Protein sequence
MKWLNSLATK LSLTKAEITL ITALLGFLLL GGVVKNFQDV EERTTLIKRA EAARLDGAEV 
DSLLRLASLK EGDLSAEPVA EQAEEGEVAP STKKKSKSAR SEKKEFHGTV AFNKASAAQL
QKIPGVGTVM AERMIAFRLL KGGKVSDMKE LLEVKGIGAK KLEQLQPYLT LD