Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1625 |
Symbol | |
ID | 3747933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | - |
Start bp | 2124104 |
End bp | 2124622 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637774164 |
Product | helix-hairpin-helix DNA-binding, class 1 |
Protein accession | YP_379921 |
Protein GI | 78189583 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATGGC TCAATTCATT AGCAACAAAG CTTAGCCTTA CAAAGGCAGA AATAACGTTA ATTACCGCAT TGCTTGGCTT TTTACTGCTT GGCGGTGTGG TAAAAAATTT TCAGGATGTT GAAGAGCGTA CCACCCTCAT CAAGCGAGCT GAAGCCGCAC GTTTGGATGG GGCTGAAGTT GATAGTTTGC TGCGCCTTGC TTCGTTAAAA GAGGGCGATT TATCGGCTGA GCCTGTTGCA GAGCAGGCTG AAGAGGGCGA GGTTGCACCA TCAACCAAGA AAAAAAGTAA AAGCGCACGG AGCGAAAAAA AAGAGTTTCA CGGCACCGTT GCCTTTAACA AAGCTTCAGC CGCACAGTTG CAGAAAATAC CGGGCGTTGG TACTGTTATG GCTGAGCGCA TGATTGCGTT TCGATTGTTA AAAGGGGGAA AAGTGAGTGA TATGAAAGAG CTGTTGGAGG TAAAAGGCAT TGGTGCCAAA AAACTTGAGC AACTGCAACC CTATCTGACG CTTGATTAA
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Protein sequence | MKWLNSLATK LSLTKAEITL ITALLGFLLL GGVVKNFQDV EERTTLIKRA EAARLDGAEV DSLLRLASLK EGDLSAEPVA EQAEEGEVAP STKKKSKSAR SEKKEFHGTV AFNKASAAQL QKIPGVGTVM AERMIAFRLL KGGKVSDMKE LLEVKGIGAK KLEQLQPYLT LD
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