| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1622 |
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| Symbol | |
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| ID | 3747930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium chlorochromatii CaD3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007514 |
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| Strand | + |
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| Start bp | 2121088 |
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| End bp | 2122179 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637774161 |
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| Product | pseudouridine synthase, RluD |
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| Protein accession | YP_379918 |
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| Protein GI | 78189580 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTTCA TAAGGCTCAG ACAAATTAAC CACTTATCCA TCATGCAGGA CGCCACACAC
ACACCACCAA ACGAGGTAGT TCAAGAAGTT CCGCTTGAGC CAAAAAAAAT TACCCTGCAC
GTAAGCCGCA CGCAAAGCCC CATGCGCATT GACGTGTACC TTACCCAACA GGTGGAAAAC
GCCACACGCA ACAAAGTACA AGAGGCTATT GAAGAGGGCA GAGTAGTTGT AAACGGCAAA
TGCGTTAAAG CCAACTATCG CTTAAAATCG TGCGATGTTA TTGAAGTTAC CTTTTTGCGC
CCCCCCGCTC CCGAACTTGC CCCCGAAGCC ATTCCCATTG CCATTATGTA TGAGGATGAC
GACTTAATGG TTATTAATAA AGAGCCGGGT ATGGTGGTGC ATCCCGCTTT TGGCAACTGG
ACAGGCACCC TTGCCAACGC CATTTTGCAC CATCTTGGCA ACAGTGCCGA AGCGTTGGAC
GCCTCAGAAA TGCGTCCGGG CATTGTTCAT CGCCTCGATA AAGATACCTC AGGACTTATT
ATTATTGCTA AAAATCCCAT AGCGCTGCAC AAACTTGCAC GCCAATTTGC AGAGCGCAAA
GTTGGTAAAA TATATAAAGC ACTTACATGG GGCGTTCCCA AGCAAGCAAG TGGTACCATT
ACAACCAACA TTGGGCGTTC TCATAAAAAT CGAAAAGTAA TGGCAAACTT TCCTTTTGAA
GGATTAGAGG GCAAAACCGC TATTACCGAT TATTGTGTAG AAGAGAATTT AGAGTGGTTT
TCGGTAATGT CGCTGCGGCT GCACACAGGA CGCACCCACC AAATTCGCGT TCACCTGCAA
CACCTTGGGC TTCCAATTGT GGGCGACGTA ACGTATGGCG GCGCTACGCC ACGCGCCCTG
CCATTTAGCA AAAGCGAACA TTTTGTAAAA AATCTCTTAG AACTACTGCC TCGCCAAGCG
CTCCATGCCG AAACGCTCAC CTTTCACCAT CCAACCACAG GCGAAGAGAT CACTTTAAGC
GCACCACTGC CTGAAGATAT GCTGCAAGCG TTGGAAAAGA TTCGAGGGAT ATGCAAATTG
CTGAAGGAAT AA
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| Protein sequence | MVFIRLRQIN HLSIMQDATH TPPNEVVQEV PLEPKKITLH VSRTQSPMRI DVYLTQQVEN
ATRNKVQEAI EEGRVVVNGK CVKANYRLKS CDVIEVTFLR PPAPELAPEA IPIAIMYEDD
DLMVINKEPG MVVHPAFGNW TGTLANAILH HLGNSAEALD ASEMRPGIVH RLDKDTSGLI
IIAKNPIALH KLARQFAERK VGKIYKALTW GVPKQASGTI TTNIGRSHKN RKVMANFPFE
GLEGKTAITD YCVEENLEWF SVMSLRLHTG RTHQIRVHLQ HLGLPIVGDV TYGGATPRAL
PFSKSEHFVK NLLELLPRQA LHAETLTFHH PTTGEEITLS APLPEDMLQA LEKIRGICKL
LKE
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