Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1580 |
Symbol | |
ID | 3747137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 2061805 |
End bp | 2063040 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637774120 |
Product | transposase |
Protein accession | YP_379878 |
Protein GI | 78189540 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3464] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000196779 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGATA CAGTTCTTTT TCAGCAAGCC TTGTGTTTAC CAGCGCCATG GTTTGTGAAA TCATCAGCAT TCGACATAGA GCAAAAACGC CTCACCATAC AGCTTGATTT TCAGAAAGGG AGTACTTTTA GTTGCCCAAC ATGCGGTCAG CATAACTTGA AAGCCTATGA TACGGCAGAG AAACAGTGGC GTCATCTGAA TTTTTTTCAG CATGAATGCT ATTTAACAGC ACGCGTACCA AGGATTTCGT GCCCCACTTG TGGTGTTAAA GCAATCACTG ATTTACCATG GGCACGTCGC GACAGCGGCT TTACGCTCTT GTTTGAAGCA ATGATTATCG CATTAGTACC ATCAATGCCC TGTAAAACGA TAGCCAACTA CGTAGGAGAA TATGATAGCC GTATCTGGCG CATTATTCAT CACTACCTTG ATGAGGTACT CGAACAGCAA GATTTATCAT CAGTTACCAA AGTTGGACTT GATGAAACAG CCAGCAAACG AGGGCACAAC TATGTAACAA GCTTTGTTGA TTTAGAGAGT TCAAAAGTGT TGTTCGTTAC AGAAGGTAAA GATGCTACAA CCGTTGAAAA ATTTCATAAG CATTTGCTTG CTCATAAAGG TAAAGCTGAA AATATTAAAG AAATTTGTTG CGATATGTCG CCAGCATTTA TCAAAGGAGT TACGACGAAC TTTCCTGAAG CCCATATCAC CTTTGATAAA TTTCACATCG TACAAGTCTT AACAAAAGCC GTTGATGAGG TGCGTCGTGA AGAACAAAAA GAGCGTCCTG AATTAGCTAA AAGTCGCTAT CTCTGGCTTA AAAATCAGGT GCATCTTAAC CAATCACAAC AGGTAAAATT GGAAAAGTTA CAGCTCAAAA AACTCAATTT GAAAACAGCG CGTGCTTATC AAGTGAAGCT GAATTTTCAA GAGTTTTTCA AGCAAGCCCC TGCCTATGCA CAAAGCTTTC TCAATCAATG GTATTACTCG GCAAGCCATA GCCGTCTTGA ACCAATCAAA GAGGCTGCAC GAACTATTAA GCGGCATTGG TATGGTATTC TCCGCTGGTT TACTTCAAAC ATTACCAACG GTAAATTAGA GGGGCTTAAT AGCATGATTC AAGCCGCTAA AGCTCGGGCT CGAGGTTACC GAACAACTAA CAATCTTATC GCTATGATCT ATTTTATTGG TGGTAAATTC GAGTTTGCTT TACCTGCCCT TACCCACTCG AAATAG
|
Protein sequence | MKDTVLFQQA LCLPAPWFVK SSAFDIEQKR LTIQLDFQKG STFSCPTCGQ HNLKAYDTAE KQWRHLNFFQ HECYLTARVP RISCPTCGVK AITDLPWARR DSGFTLLFEA MIIALVPSMP CKTIANYVGE YDSRIWRIIH HYLDEVLEQQ DLSSVTKVGL DETASKRGHN YVTSFVDLES SKVLFVTEGK DATTVEKFHK HLLAHKGKAE NIKEICCDMS PAFIKGVTTN FPEAHITFDK FHIVQVLTKA VDEVRREEQK ERPELAKSRY LWLKNQVHLN QSQQVKLEKL QLKKLNLKTA RAYQVKLNFQ EFFKQAPAYA QSFLNQWYYS ASHSRLEPIK EAARTIKRHW YGILRWFTSN ITNGKLEGLN SMIQAAKARA RGYRTTNNLI AMIYFIGGKF EFALPALTHS K
|
| |