Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1539 |
Symbol | |
ID | 3746598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 2015173 |
End bp | 2018994 |
Gene Length | 3822 bp |
Protein Length | 1273 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637774079 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_379837 |
Protein GI | 78189499 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG2202] FOG: PAS/PAC domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACTA TAATTCCTGA TTTTCAACAA CCTGATGCTG TAGTAATTGC ATTACTTGAT TCATTTTCTG ACGCCTTGTT TATTATGGAT GCTGATAGCA TTATTCTTCA TGCTAATGAG GCTTTTGCAA CACAGTGTGG TAAAAAACCA GAAGAGTGTA TTGGTTTTAA TGCGTGCAGC CTTATAGAGT CGGTGTTTGT AATGCCTCAT TTTGCTTATG AGTGTAGTGC AACAACCAAT GAGGTACTCG ATAGTGCAAA GCAACAATCA TTTGAGACTA CTTATTTACA TCAAAGCTGG AAAACCACCA TAACCCCATT GCATCTAAAA GAATACGATC AAGGTGCCAC ACAACTCCTT GTTCGCATTG AAGATATTTC AGAAAAAAAG AATCTTGAAC AGCAATCACA AGTAACAGAT ACACTGCACA AAACACTGCT TGAAACTATT CCGGGTTTTG CCATTATTCT TGATGCTTCT GGTCATCTGA TGGCATGGAA TAATTACACT CGTACTATTA TTTTCGGTAA AACCGATAAT GAAATGTACG ATGTTGATCC ATTTGGTTTT ATATGTCCTA CCGAAAGAAC TTCTATTAGA AAAAAATTCT TTAAAACGCT TCGCGCTGGA TGTGAAAAAA GCGCTGAAAT AAAAATTTTT CCACAAAAAG AAAAACATGC TATTTGGCTA CTCATTCATG CAAAACCTGT ATTTATTGAT AATCAAATGT GTGTTGTTGC TGTTGGAATT AACATTACCG AACGCAAGCG TGTTGAAGCT GAACTGCTTG AAAATAAGCT ACGCTACAAC CATGCGATGG AAGCTGCTCG TGCTGGAATA TGGGAGTGGA ATGTTAAAAC CGATAAACTC ACTTGGTCAG AACAATTATG GGGATTGTAT GGGCTACAAG TCAATAGTGA ACCTCTAACT CATCAGCTTT GTGTTACAAC GGTTCATCCC GATGATCGAG AAATGGCATC GCAGATGATT AAATCAGCCG TGCAACAACA AATTCCTGCC TCTATTGAAT ATCGAGTTCT TCATCCTGAT GGCTCAGTCC ATTGGCTCAA TTCCCGTGGC ATTCCCCTGC ATGACGATGA TGGAACACTG CATCATTACA TTGGCACTAT TATTGATATT ACTGAACGCA AGGAAACAGA AATTGTGCTG CTTGAAAACA AAATACGACT GAAACAAGCG TTGAAAGCTA CCCGTGCAGG GGTTTGGGAA TGGGAGCTTG CAACTAATGA AAATAGTTGG TCAGACGAAA TATGGGCACT CTATGGAATT GAACAAGATC ATCAACAACC ATCGTTTGAC TTATGGGTAA ATACCGTTCA TCCAGATGAT CGCTTACTCG CAATAAAGGC TGTTACAGAA GCTACTCAAC AGGGCGCAGA AATTAACGTT GAGTATCGTG TTTGCCATCA TGACGGTTCT GAGCATTGGC TTATGTCGCG TGGTAAACCA ATATTAGACC CGCAAGGCAA TACCATCCGT TATATTGGAA CTGCCCTTGA CATTACAGAG CGCAAAAAAA TGGAAATTGC GCTTGGGGAA AGCCAACGGC GCTTTACCTT TGCGCTTGAA GCTACCAATG CCGGTGTTTG GGAGTGGGAT ATTAAAACCG ACGTCATTAC GTGGACTGAG CGAGTATGGA CACTCTATGG TTTAGAGCCT TTTAGTGCAA CGCCCTCGCA TCAGTTATGT GCAACACACG TTCATCATGA TGATTACGAA AAAATCTTTC AAAACATCAT GGTAGCCGTT CAACGCGAAA GCAATATCAA CGTTGAATAT CGTGTATGCC ATCCTGATGG TACAACTCAT TGGCTCATGT GTCGGGGAAT GCCTTTGCGC AACGCAAACG GCACCGTTTC ATGCTATATG GGCACGGTAA TGGATATTAC AAAACGGCGA GAGTTATTAG AAAAACTACG GAGAAGTGAA CAGCGTTATC GCCTGCTTTT CGATAATATG ATGAATGGTT TTGCCTATTG CAATATGATA TATGATGGCA AAAAACCAAT AGATTTTGTT TTTCTTAATG TAAACCAAAC ATTTAAAAAA TTCTGTAAAA CAAAAGATGT TGTAGGTAAA AAAGCAAGCG AAGTCATACC TAATTTTATG ACGTTAGCTA ATGAATTATT TGTGGTATGT GCTCGCGTAG CTCATAGTTG CCAATCGGAA CAATTTGAAT ATTTCTTTAA GCCATTTAAT GAATGGCTTT TTATCTCGAT TTCAAGCCCA CAGAAAGGCT ATTTTATGGT GATATTCGAT ATCATCTCTG AACGCAAACG GGCAGAGCAA CTTATTTTGG ATAGCAAGCT AAAACTCGAA GCCGCACTTG AAAGCATGAG TGATGCTATT TTTATTTCTG ACACTGCGGG ACGTTTTATT GAATTCAACA ACGCATTTGC CGCTTTCCAT AAGTTTGAAA GAAAAGAAAA ATGCTTTATG ACGCTTACCG AATATCCAGC CATTCTCGAC CTTTTTACCG ATAATAACCA ACTAACCGAT CTTGCAGAAT GGCCAGTATC AAGAGCATTA CAGGGTGAAA CCATGACCAA TGCGGAATAC ACCTTACATC GTAAAGACAC AAACCATACA TGGATAGGAA GCTATAATTA TGCACCTATT CGCAATAACG AAGGGGAAAT TACCGGTTCT GTTGTTACTG CTCGCGACAT TACCGAACAA AAGCTCATTG AAAAAACACT TAAAGAAAGC GAACTTAAGT TTAGAAGTAT TTTTGACTAT TCACCCGTTG CTATTGGTAT TGGCAATGCT ACAAACGGTA TGCTCATAGA TGTTAACACC TTTTGGTTAG AACTTTTTGG CTACACCAAA GAAGAAGTCG TTAATCAAAC CGTAACCGAT ATTGGTATTT ACGTTAAACC ACAAGAACGA AACGAGATTC TTGACATTCT TGCAGCACAT GGTAGAGTAA CTAACAAACC TGTTCGATTA CGCAAAAAAA GTGGTGAATA TATAACGATT CTCTACTCAT CGGTATTTAT GAAGCTTGAC CATAAAACCA TTTTACTCGT AATTATTACC GATGTTACGT TGCAAGAAAT ACAACAACAA AACATTACGC TGCTTGAAAA AGCTGTAGCT GAACGCACAC AACAATTACA AGACGAAGTG GAACAGCTTC AACGCTTTAT AAGTATGATA TCTCACGAAT ACCGCACACC ACTTGCAATT ATTCGAGGCA ATCTTGATCT CATTGGTTTA AAAAACAAAA CAAAGAAAAT TTCCAATGAA GCTGAAATCA ATAAAATAAA TCGAGCTATT GATCGCTTGG TTGAAGTAAT GGAAGTCTCT ATGCAAGAAA GTCGAATGAT AGAATCTAAG CAAGAAACCG TCATGACAAC GTTCCAGATT GCCGCAATAG TTACCTCACA GATAGAAACA TTCCGTGCCA TGTGGACTGA ACGCTTAATT ATATATTCAG AAACGGTAGA AAATAGCTTA GTGCTTGGTG AACCATCGCA ACTCAAATTA GCCATTTTTA ACCTTTTAGA TAATGCACGA AAATACTCAC CCACTGATTC ACCTATCAAA GTTACATGCT CTCTTGATGC CGATACGGTT ATGATTCGAA TACGTAACTA TGGTACAAGT ATTACCAAAG ATGAAGAAAA AACGTTATTT GAAAAATTTC AGCGTGGCAG CAACTCTATG AATACAAGTG GAGCTGGTTT AGGGCTTTGG CTTGTAAAAA GCATTATCAA TCGCCATAAT GGACAAGTAA GCTTAACCTG TATTGATTCA GGTGTAGAAA CGTTAGTTCG GTTACCTTTG CACACAACGT AA
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Protein sequence | MNTIIPDFQQ PDAVVIALLD SFSDALFIMD ADSIILHANE AFATQCGKKP EECIGFNACS LIESVFVMPH FAYECSATTN EVLDSAKQQS FETTYLHQSW KTTITPLHLK EYDQGATQLL VRIEDISEKK NLEQQSQVTD TLHKTLLETI PGFAIILDAS GHLMAWNNYT RTIIFGKTDN EMYDVDPFGF ICPTERTSIR KKFFKTLRAG CEKSAEIKIF PQKEKHAIWL LIHAKPVFID NQMCVVAVGI NITERKRVEA ELLENKLRYN HAMEAARAGI WEWNVKTDKL TWSEQLWGLY GLQVNSEPLT HQLCVTTVHP DDREMASQMI KSAVQQQIPA SIEYRVLHPD GSVHWLNSRG IPLHDDDGTL HHYIGTIIDI TERKETEIVL LENKIRLKQA LKATRAGVWE WELATNENSW SDEIWALYGI EQDHQQPSFD LWVNTVHPDD RLLAIKAVTE ATQQGAEINV EYRVCHHDGS EHWLMSRGKP ILDPQGNTIR YIGTALDITE RKKMEIALGE SQRRFTFALE ATNAGVWEWD IKTDVITWTE RVWTLYGLEP FSATPSHQLC ATHVHHDDYE KIFQNIMVAV QRESNINVEY RVCHPDGTTH WLMCRGMPLR NANGTVSCYM GTVMDITKRR ELLEKLRRSE QRYRLLFDNM MNGFAYCNMI YDGKKPIDFV FLNVNQTFKK FCKTKDVVGK KASEVIPNFM TLANELFVVC ARVAHSCQSE QFEYFFKPFN EWLFISISSP QKGYFMVIFD IISERKRAEQ LILDSKLKLE AALESMSDAI FISDTAGRFI EFNNAFAAFH KFERKEKCFM TLTEYPAILD LFTDNNQLTD LAEWPVSRAL QGETMTNAEY TLHRKDTNHT WIGSYNYAPI RNNEGEITGS VVTARDITEQ KLIEKTLKES ELKFRSIFDY SPVAIGIGNA TNGMLIDVNT FWLELFGYTK EEVVNQTVTD IGIYVKPQER NEILDILAAH GRVTNKPVRL RKKSGEYITI LYSSVFMKLD HKTILLVIIT DVTLQEIQQQ NITLLEKAVA ERTQQLQDEV EQLQRFISMI SHEYRTPLAI IRGNLDLIGL KNKTKKISNE AEINKINRAI DRLVEVMEVS MQESRMIESK QETVMTTFQI AAIVTSQIET FRAMWTERLI IYSETVENSL VLGEPSQLKL AIFNLLDNAR KYSPTDSPIK VTCSLDADTV MIRIRNYGTS ITKDEEKTLF EKFQRGSNSM NTSGAGLGLW LVKSIINRHN GQVSLTCIDS GVETLVRLPL HTT
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