| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cag_1525 |
|---|
| Symbol | |
|---|
| ID | 3746584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium chlorochromatii CaD3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007514 |
|---|
| Strand | + |
|---|
| Start bp | 2003262 |
|---|
| End bp | 2005001 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637774065 |
|---|
| Product | type I restriction modification enzyme methylase subunit |
|---|
| Protein accession | YP_379823 |
|---|
| Protein GI | 78189485 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTACAAA ACAACCCTGA ACTTAAAAGC AAAATAGAGC AACTCTGGAA CAAGTTTTGG
GCTGGTGGCA TCTCCAACCC ACTAACGGCT ATTGAGCAAA TCACCTACTT GCTCTTTATG
AAACGGCTTG ATGAGCTTGA CCTAAAAAAA CAAGCCGATG CTGAATGGAC TGGTGAGCCT
TACATCTCTC GATTTGCGGG CGAGTGGATT CCCCCCGAAT ATCGCGCCAA GCTCTCAGAA
CAGGATACGG TGGAGGAACA GCAGAAAAAA CAAGCTGAAG CCACAAAATT TGCCATTGCA
AAACAGACGT TGCGTTGGAG CGAGTTCAAG CACATGCAAG CTGAGGAGAT GCTTCTGCAT
GTGCAAAGCA AGGTTTTCCC TTTCCTGAAA GATATGAATG GCGCTGAATC CAACTTCACC
CATCACATGA AGAATGCCGT CTTCATTATC CCAAAACCAT CGCTCATGGT TGAAGCAGTA
AAGACGGTGG ATGAGATTTT TGAGATTATG GAAAAGGACT CGCAGGAAAA GGGACAAGCC
TTTCAAGATA TTCAGGGTGA TGTGTATGAA ATGCTGCTTT CTGAAATTGC ACAAGCTGGT
AAAAATGGTC AGTTCCGCAC GCCGCGCCAC ATCATTAAAT TGATGACGGA ACTTGTGCAA
CCGCAGCTTG CGCAGCGCAT TGGCGACCCC GCGTGTGGCA CGGCAGGCTT TTTGCTGGGT
GCCTATCAAT ACATTGTAAC GCAGCTTGCC ATAAAAACCA GCGATCATTT TCGTGGCGTT
ACGAATATGA CCGATAGAGG CGCACATACT TTTCAACCCG ATGAAGATGG TTTTGTGCGC
ACCTCAGTAG CATCCGGCTT AACTGAAACA GCACAAGCCA TTCTGCAATC CAGCCTTTAC
GGTTACGACA TTGACAGCAC AATGGTGCGT TTGGGATTGA TGAACCTTAT GATGCACGGC
ATTGATGAGC CGAACATTGA TTACAAAGAC ACCCTCAGCA AAAGCTATAA CGAGGAAGCG
GAATACCACA TTGTTATGGC AAATCCGCCA TTTACCGGCA GTATTGATAA GGGCGACATT
AACGAAAACC TGACGCTTTC CACCACCAAA ACAGAACTGC TTTTTGTTGA AAACATTTAT
CGCCTGTTGA AACGAGGCGG CACAGCTTGC GTTATTGTGC CGCAAGGCGT GCTGTTTGGA
TCGGGCACGG CGTTTAAAAA CTTGCGCCAA CTGTTAGTTG AACGGTGCGA ACTTAAAGCC
GTTATCACCA TGCCAAGCGG CGTTTTTAAA CCCTATGCTG GAGTAAGTAC CGCTATTTTG
CTGTTTACCA AAGTGTATGA AAGCAAGGAA AAAGTGCGAC AACCAGCCAC CCATCAAGTG
TGGTTTTACG ACATGCAATC CGACGGCTAC TCGCTTGACG ATAAGCGCAC CAAGTTAGAG
GGCTATGGCG ATTTGCAGGA GATTGTCGCC AAATTTCATG CCCGCAATCC CGCAACCAAC
AGCGACCGCA CGCAGAAATG CTTTTTTGTG CCTTACGCTG ACCTTGAAGC CGAAGGGTAT
GACCTCTCAA TTTCGCGCTA CAAAGAAGAT GTGTTTGAAG AGGTACACTA TGAAGCACCA
AGCGCCATAC TGCATCAATT GCTGGCAGCA GAAGTGGGTG AAACCGCCAA TGCTCACCTT
GCCAACATTC ATGGCGGAAT TGTTAAGGAA TTGCTTGAAT TACGGGAGAT GATTGGATGA
|
|---|
| Protein sequence | MLQNNPELKS KIEQLWNKFW AGGISNPLTA IEQITYLLFM KRLDELDLKK QADAEWTGEP
YISRFAGEWI PPEYRAKLSE QDTVEEQQKK QAEATKFAIA KQTLRWSEFK HMQAEEMLLH
VQSKVFPFLK DMNGAESNFT HHMKNAVFII PKPSLMVEAV KTVDEIFEIM EKDSQEKGQA
FQDIQGDVYE MLLSEIAQAG KNGQFRTPRH IIKLMTELVQ PQLAQRIGDP ACGTAGFLLG
AYQYIVTQLA IKTSDHFRGV TNMTDRGAHT FQPDEDGFVR TSVASGLTET AQAILQSSLY
GYDIDSTMVR LGLMNLMMHG IDEPNIDYKD TLSKSYNEEA EYHIVMANPP FTGSIDKGDI
NENLTLSTTK TELLFVENIY RLLKRGGTAC VIVPQGVLFG SGTAFKNLRQ LLVERCELKA
VITMPSGVFK PYAGVSTAIL LFTKVYESKE KVRQPATHQV WFYDMQSDGY SLDDKRTKLE
GYGDLQEIVA KFHARNPATN SDRTQKCFFV PYADLEAEGY DLSISRYKED VFEEVHYEAP
SAILHQLLAA EVGETANAHL ANIHGGIVKE LLELREMIG
|
|---|
| |