Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cag_1513 |
Symbol | radC |
ID | 3747146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium chlorochromatii CaD3 |
Kingdom | Bacteria |
Replicon accession | NC_007514 |
Strand | + |
Start bp | 1987113 |
End bp | 1987781 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637774052 |
Product | DNA repair protein RadC |
Protein accession | YP_379811 |
Protein GI | 78189473 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACTGC ACGATATTGA TCCCGATAAT CGCCCGCGCG AACGCTTTCT CCAGCATGGT GCTGCCGCGC TTAGCCCAGC CGAATTATTG GCACTCATTT TGCGTTCAGG CTCGCAACAG TACAACATTC TTGATACCTG CCATCACATC ATCAACCGCT TTTCGCTTGA AAAACTAAGC GATGTTTCAC TTAAAGAGCT TCAACAAATC AAAGGCATTG GCGAAAGTAA AGCCATGCAG ATTGTGGCAA TTTTTGAGCT AAATCGGCGC TTACACTACA GTCGCAACCA GCTACGCAAA ATTATGGCTG CCGGAGATGT GTTTGAATAC ATGAGCGGTC GCATTCCCGA TGAAAGTAAA GAGCACCTCT TTGTGTTGCA CTTAAACACA AAAAATCAAG TCATTAAAAA TGAGCTGATC TCCATTGGCA CTCTTAACAC CGCCGTTATT CATCCTCGTG AAATTTTTAA ATCGGCAATT CGTGAAAGTG CCCACTCAAT CATTGTGGTT CATAATCACC CTTCTGGCGA TGTAAATCCA AGTAATGCCG ACAAAAAAAT TACAAACGAG TTAAAGCAGG CTGGAGCCTT TATGCAAATC GAAATGCTGG ATCATGTTAT TATGAGTAAA ACCGAGTGGT ATAGCTTTCG AGAACGAGGG TTGTTGTGA
|
Protein sequence | MKLHDIDPDN RPRERFLQHG AAALSPAELL ALILRSGSQQ YNILDTCHHI INRFSLEKLS DVSLKELQQI KGIGESKAMQ IVAIFELNRR LHYSRNQLRK IMAAGDVFEY MSGRIPDESK EHLFVLHLNT KNQVIKNELI SIGTLNTAVI HPREIFKSAI RESAHSIIVV HNHPSGDVNP SNADKKITNE LKQAGAFMQI EMLDHVIMSK TEWYSFRERG LL
|
| |